KEGG   Clostridium sp. AWRP: DMR38_19450
Entry
DMR38_19450       CDS       T07742                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
clos  Clostridium sp. AWRP
Brite
KEGG Orthology (KO) [BR:clos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clos03019]
    DMR38_19450
Messenger RNA biogenesis [BR:clos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DMR38_19450
SSDB
Motif
Pfam: HD HDOD Cas3_HD
Other DBs
NCBI-ProteinID: AZV58582
UniProt: A0A3Q9S7X1
LinkDB
Position
4165440..4166342
AA seq 300 aa
MNKKELFLSNIENGHNVKLSLMVMKIIFKDASKIVCILADKSGEIKANMPNINENITQGT
VLEAEGIKDNILDIKNYKLISDYNVSDYLPTVKRPIEDIMEEIELYTNKYIISKEARALS
DYFFKDELFLNKFKRGIGGVSMHHNYIGGLAEHTLNVMYLTAVLCERYQCRRKEMAMLAA
KLHDIGKVYELYYDGPFKYTLRGEMEGHIVIGVELLDKAIRENPTLYSEDFIMRIKGCIV
QHHGKLEFGSPREMKTEESFIVNYADSIDATMNKICQIKDETEPDNWSEFDRRIQTKLYL
NT seq 903 nt   +upstreamnt  +downstreamnt
atgaataaaaaagaactttttttaagtaatatagaaaatggacataatgtaaaactatca
ttaatggtaatgaaaataatatttaaagatgcttctaagattgtatgtatattagccgat
aagagtggagaaataaaagctaatatgccaaatataaatgaaaatattacacaaggaaca
gtactcgaggctgaaggaattaaagataatattctagatataaagaactataaattaatt
tctgattataacgtttcagattatcttccaacagtaaaaagacctatcgaagatatcatg
gaggaaattgaactgtatacaaataaatatattatttctaaagaagctagagctttaagc
gactatttctttaaagatgaactatttctaaataaatttaaaagaggaataggtggtgtt
tccatgcatcacaattatataggaggccttgcggaacacaccttgaacgttatgtattta
actgctgtgctttgtgaaaggtatcaatgccggagaaaagaaatggcaatgctagcagca
aaactccacgacattggaaaagtttatgaattgtattatgatggcccttttaaatatact
cttagaggagaaatggaaggtcatattgttattggggtagaactactagataaagctatt
agggaaaatcctacactgtattcagaggattttataatgaggataaaaggatgtattgtt
cagcatcatgggaaacttgaatttggttctccaagagaaatgaaaacagaagaatcattt
atagttaactatgctgattccatagatgctactatgaataaaatttgtcagataaaggat
gaaactgaacctgataattggtcagaatttgatagaagaattcaaacaaaattatactta
taa

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