Clostridium sp. AWRP: DMR38_20210
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Entry
DMR38_20210 CDS
T07742
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DMR38_20210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clos03021
]
DMR38_20210
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_20210
Enzymes [BR:
clos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DMR38_20210
Transcription machinery [BR:
clos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DMR38_20210
DNA repair and recombination proteins [BR:
clos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DMR38_20210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AZV58724
UniProt:
A0A3Q9SA41
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All DBs
Position
complement(4321825..4322772)
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AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVENSEDGNYGKFVVEPLERGYGITLGNALRRILLSSLPGVAANHIKIDG
VLHEFSTIRGVKEDVAELILNIKELALKMNGEGPKTIYIDAQGPGEVVAGDIKTDGDVEI
INKDLHIATLDDDGKLYMEIAVNGGRGYVSQRKNKSEDMPIGTIPVDSIYTPIKRVNFAV
ENTRVGQITDYDKLSLEVWTNGTILPDEAVSLSAKILIEHFKLFMTLTDHANNVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERTMDDMMKVRNLGKKSLEEVE
QKLDALGLSLKQSED
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaaacccaaaatagaatgtgttgaaaatagtgaagatggtaactat
ggaaagtttgtagtggagccccttgaaagaggctatggtattactcttggtaatgcactt
agaaggattcttctttcttcccttccaggagttgctgctaatcatataaaaatagatggt
gtacttcatgaattttcaactattcgtggagtaaaagaggatgttgcagagctaattcta
aatataaaagaattagctttaaagatgaatggagaaggtcctaaaactatatatatagat
gcgcaaggaccaggagaagttgttgcaggagacataaaaacagatggtgatgttgaaata
attaataaagacttacatatagctaccttagatgatgatggtaaactctatatggagatt
gctgtcaacggaggaagaggatatgtttctcaaagaaagaataagtctgaagacatgcca
ataggtactattcctgtagattcaatatatactcctattaaaagagttaattttgctgta
gagaatacaagagttggtcaaataactgattatgataaattatcattggaagtttggact
aatgggactatattaccagatgaagctgtaagtttatcagctaaaattctcatagaacat
tttaaactatttatgactcttactgatcatgctaataatgtagaaataatggttgaaaag
gaagaggataaaaaggaaaaagttcttgagatgacaatagaagaattagacctttcagtg
agaagttataattgtctaaagagggctggaataaatacagttcaagagttaacagaaaga
acaatggatgatatgatgaaggtaaggaatttgggtaaaaaatccttagaagaagttgag
caaaagcttgatgccttaggattatcattaaagcaaagtgaagactaa
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