Chlamydia pneumoniae LPCoLN: CPK_ORF00009
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Entry
CPK_ORF00009 CDS
T01859
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
clp
Chlamydia pneumoniae LPCoLN
Pathway
clp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPK_ORF00009 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clp03021
]
CPK_ORF00009 (rho)
03019 Messenger RNA biogenesis [BR:
clp03019
]
CPK_ORF00009 (rho)
Transcription machinery [BR:
clp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CPK_ORF00009 (rho)
Messenger RNA biogenesis [BR:
clp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPK_ORF00009 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
DUF5855
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACZ32493
LinkDB
All DBs
Position
139997..141391
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEILPKVKETKKHAYVSMQEKSCVGECAVVASESEEAESVTVTKIAKLQRMGIE
ELNILARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNQRIVMEMGKDHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGNDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELERVYLFRQAIADLTAIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagcgttcttcagaaatcttgcctaaggtgaaggaaacgaaaaaacatgct
tacgtttctatgcaggaaaaatcttgtgtaggggagtgtgctgtagttgccagtgagtct
gaagaggccgagtctgtcacagttacaaaaattgctaaactgcaaagaatgggaattgaa
gagctgaatatattagctcgccaatacggtgtgaaaaatataggatctctaacaaagtct
caggtcgtctttgagattgttaaagccaagtcagagcgcccagatgaattgctgataggt
gaaggcgtgttagaagtccttccagacggatttggatttctgagatccccaacctataat
tacctaccttctgctgaagatatttatgtttctccagctcagattcgtagatttgatctc
aaaaaaggtgatacgattatcggtacgatacgctcacctaaagagaaagaaaagtacttt
gctctattgaaagtagataagatcaacggatctactccagataaagctaaagaacgtgta
ctttttgaaaacctgacccccctctaccctaatcaaagaatcgtgatggaaatggggaaa
gatcatttggctgagagagtcttagatcttaccgcccccattggaaaaggacagcgggga
ttgattgtagccccaccaagatccgggaaaactgtcattctccaaagcatagcacacgcg
attgctgtgaataatcctgatattgttcttattgtcttgttaattgacgaaagacccgaa
gaagttaccgatatgattcggcaagttcgtggagaagttgttgcctcgacatttgacgaa
caaccagaaaggcatattcaggtcgctgagatggttatagagaaggcacgtcgtttagtg
gaacatggaaatgatgtggtcattttactcgattccataacacgattagcacgtgcctat
aatacagttcagccgcattctggaaaaattcttaccgggggtgtcgatgctagtgcattg
cacaaacctaagcgtttcttcggtgctgcaagaaatattgaaggcgggggatcgctcaca
attcttgcaaccgctttaattgatactggttccagaatggacgaagtgatttttgaagaa
ttcaaaggcactggaaatatggaactcgtcttggatcgacgtctgtcagatcgaagaacc
taccccgctattgatttaattaagagtggaactagaaaagaagaactcctctatcatcct
agtgaattagaaagggtctaccttttccgtcaggccatagcagatcttactgctatagac
gccatgcatctcttgctaggaaggttgaagaaaaccaatagtaacgcagaattcttgttg
tcactcaaagaatag
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