Chlamydia pneumoniae LPCoLN: CPK_ORF00055
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Entry
CPK_ORF00055 CDS
T01859
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clp
Chlamydia pneumoniae LPCoLN
Pathway
clp03030
DNA replication
clp03430
Mismatch repair
clp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPK_ORF00055
03430 Mismatch repair
CPK_ORF00055
03440 Homologous recombination
CPK_ORF00055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clp03032
]
CPK_ORF00055
03400 DNA repair and recombination proteins [BR:
clp03400
]
CPK_ORF00055
Enzymes [BR:
clp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPK_ORF00055
DNA replication proteins [BR:
clp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPK_ORF00055
DNA repair and recombination proteins [BR:
clp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPK_ORF00055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACZ32539
LinkDB
All DBs
Position
103557..104306
Genome browser
AA seq
249 aa
AA seq
DB search
MSLLKDTVFTCLDCEMTGLDVKKDRIIEIAAVRFTFDSVISSIEFLINPERVVSAESQRV
HHISNAMLRDQPKIAEVFPQIKAFFKEGDYIVGHSVGFDLQVLSQEMERIGETFLSKYTI
IDTLRLAKEYGDSPNNSLESLAVHFNVPYDGNHRAMKDVEININIFKHLCKRFRTLEQLK
QVLAKPIKMKYMPLGKHKGRCFSEIPLAYLQWASKMDFDSDLLFSIRHEIKHRQKGTGFS
QVNNPFMEL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattaaaagatacggtttttacttgcctagattgtgaaatgacaggtctagat
gtaaaaaaagatcgtattattgaaattgccgctgttcgctttactttcgatagtgtaatt
agttcgatagaatttttaatcaatccagaacgcgttgtatctgcggagtcccagagagtc
caccatatctccaacgctatgttgagagatcagccgaaaatcgccgaagtttttcctcaa
atcaaagcattttttaaagaaggcgactatatcgtaggacatagcgtcggttttgatttg
caggttctctctcaagagatggaaagaatcggagagaccttcctctcaaagtataccatt
attgataccctccgattagcaaaagaatatggagatagtcctaataattctctagaatcc
ttagccgtacactttaatgttccctatgatgggaatcatcgtgccatgaaggatgtagaa
atcaatatcaatatttttaaacatctttgtaaacgtttccgaacgttagaacaactgaaa
caggtgttagcaaaacctattaaaatgaaatatatgcccctagggaaacacaagggacga
tgtttttcagaaattcctcttgcctatcttcaatgggcatcaaaaatggatttcgattca
gaccttcttttttctatccgtcatgaaatcaagcatagacaaaaggggaccggattttca
caagttaacaatccctttatggaattgtaa
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