Chlamydia pneumoniae LPCoLN: CPK_ORF00066
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Entry
CPK_ORF00066 CDS
T01859
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
clp
Chlamydia pneumoniae LPCoLN
Pathway
clp03030
DNA replication
clp03430
Mismatch repair
clp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPK_ORF00066 (dnaE)
03430 Mismatch repair
CPK_ORF00066 (dnaE)
03440 Homologous recombination
CPK_ORF00066 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clp03032
]
CPK_ORF00066 (dnaE)
03400 DNA repair and recombination proteins [BR:
clp03400
]
CPK_ORF00066 (dnaE)
Enzymes [BR:
clp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPK_ORF00066 (dnaE)
DNA replication proteins [BR:
clp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPK_ORF00066 (dnaE)
DNA repair and recombination proteins [BR:
clp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPK_ORF00066 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
DUF4665
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ACZ32550
LinkDB
All DBs
Position
complement(91294..95016)
Genome browser
AA seq
1240 aa
AA seq
DB search
MTWIPLHCHSQYSVLDAMSSIKDFVAKGQEFGIPALALTDHGNLYGAVDFYKECTQKGIQ
PIIGCECYIAPGSRFDKKKEKRSRAAHHLILLCKNEQGYRNLCILTSLAFTEGFYYFPRI
DKDLLRQYSEGLICLSGCLSSSVSDAALKSPEALLLELQWFQDLFKDDYFTEVQLHKMSE
ESIAGFKEEWLKQEYYSLIEKQIKVNTAVLEASKRLGIPTVATNDIHYINANDWQAHEIL
LNVQSGETVRIAKQNTHIPNPKRKVYRSREYYFKSPAQMAELFKDIPEVISNTLEVAKRC
DFTFDFSKKHYPIYVPESLKTLNSYTEEDRYQASAVFLKQLAEEALPKKYSSEVLAHIAK
KFPHRDPIDIVKERMDMEMAIIIPKGMCDYLLIVWDIIHWAKANGIPVGPGRGSGAGSVL
LFLLGITEIEPIRFDLFFERFINPERLSYPDIDIDICMAGRERVINYAIERHGKDNVAQI
ITFGTMKAKMAVKDVGRTLDMALSKVNHIAKHIPDLNTTLSKALETDPDLHQLYINDAES
AQVIDMALCLEGSIRNTGVHAAGVIICGDQLTNHIPICISKDSTMITTQYSMKPVESVGM
LKVDLLGLKTLTSINIAMSAIEKKTGQSLAMATLPLDDATTFSLLHQGKTMGIFQMESKG
MQELAKNLRPDLFEEIIAMGALYRPGPMDMIPSFINRKHGKEIIEYDHPLMESILKETYG
IMVYQEQVMQIAGALASYSLGEGDVLRRAMGKKDFQQMEQEREKFCKRACNNGIDPELAT
VIFDKMEKFAAYGFNKSHAAAYGLITYTTAYLKANYPKEWLAALLTCDSDDIEKVGKLIR
EAQSMGIPILPPHINVSSNHFVATDEGIRFAMGAIKGIGHGLIESIVEERDHHGPYESIR
DFIQRSDLKKVSKKSIESLIDAGCFDCFDSNRDLLLASVEPLYEAIAKDKKEAASGVMTF
FTLGAMDRKNEVPICLPKDIPTRSKKELLKKEKELLGIYLTEHPMDTVRDHLSRLSVVLS
GEFENLPHGSVVRTVFIIDKVTTKISSKAQKKFAVLRVSDGIDSYELPIWPDMYEEQQEL
LEEDRLIYAILVLDKRSDSLRISCRWMKDLSIVNENIIYECDQAFDRIKNQVQKMSFTMS
TSGKETKTKGNKPNENGHTQALAPVTLSLDLNELRHSHLCILKKIVQKHPGSRTLVLVFT
QDNERVASMSPDDAYFVCEDIEELRQELVTADLPVRVITV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
ttgacctggataccccttcactgtcattctcaatactctgttcttgatgcaatgagctcc
atcaaagatttcgttgcgaaaggtcaggaatttggaattcccgctctggctctaacagac
catgggaatctttatggagctgttgatttctataaagaatgcactcaaaaagggatccaa
cccatcattggttgcgagtgttatattgctccaggatcacgtttcgataagaaaaaagag
aagcgtagtcgtgcagcacaccatctcattttattatgtaaaaatgaacaagggtaccgc
aacctttgtattttaacctccctagcatttactgagggtttctattactttcctcggata
gacaaggatcttttgagacagtactctgaaggcttaatctgtttatctggttgtttatct
agttctgtttcagatgctgccttaaagtctccggaagctctgcttcttgaattgcaatgg
tttcaagacctattcaaagatgattatttcacagaagtacaactacacaagatgtccgaa
gagagcattgcaggctttaaagaggaatggttaaagcaagaatattactctctcattgaa
aaacagatcaaagtcaatactgcagtgttagaagcaagtaagcgcttaggcattcctact
gtagctacgaatgacatccattacatcaatgcaaacgattggcaagctcatgaaatcctg
ttgaatgtccaatctggggagactgtgcggattgcgaaacagaatactcatatccccaat
cctaaacgaaaggtctatcgcagtcgcgagtactattttaaatcccctgcgcaaatggca
gagttatttaaagatattcctgaggtcatttccaacaccttagaagttgccaaacggtgt
gattttacttttgatttttccaagaaacactaccctatctatgtccctgaatctttaaaa
accttaaacagctacacggaggaagaccgttatcaagcttctgcagtcttcttaaaacag
ctagctgaagaagctttgcctaagaaatactcttctgaagttcttgctcatattgctaag
aaatttccacatcgggaccctatcgatattgtcaaagaaaggatggacatggagatggcc
atcatcattcctaaaggaatgtgtgactatcttttgattgtttgggacattattcattgg
gccaaagcaaatggcattcctgtaggccctggaagaggttcaggagctggatccgtatta
ctatttttgttagggatcacagaaatcgagcccatacgatttgatttattctttgagaga
tttatcaatcctgagcgtttgtcttacccagatattgacatcgatatttgcatggcagga
cgtgaacgtgtcattaattatgcaattgagcgtcatggcaaagataatgtagctcaaatc
attacttttggaactatgaaagccaaaatggctgtcaaagatgtgggaagaactttagac
atggccttatctaaagtgaaccacattgcgaaacatattccagatttaaatactacgctg
tctaaagctttagaaacagatcctgacctccatcagctctatattaacgatgccgaatct
gcacaagtgattgatatggcgctttgcttagaaggctccatacggaatacaggggttcat
gctgctggtgtgattatctgtggagaccagctgaccaatcacattccgatttgtatttct
aaagactccacaatgattacaacacaatactctatgaaacccgtggagagtgttggaatg
cttaaagtcgacttgttagggctcaagactttaaccagtatcaatattgcgatgtctgca
attgaaaagaaaacaggacaatcgctagctatggcgacactgcctttggatgatgccacc
acattttctcttttacatcagggaaagactatggggatatttcaaatggaatccaagggg
atgcaagaattagcaaaaaacctacgccctgacctctttgaggaaatcattgctatgggt
gctttataccgcccaggccctatggatatgattccttcttttattaaccgcaagcatggc
aaagaaattatagaatacgaccatccccttatggaatccattcttaaggaaacctatgga
attatggtctaccaagagcaagtcatgcagattgctggtgcattagctagttattctctt
ggagaaggtgatgtattacgacgtgccatggggaagaaagacttccaacagatggagcag
gagcgcgaaaagttctgtaaacgcgcctgcaataacggcatagatcctgagttagcgact
gtcatctttgataagatggaaaaatttgctgcctacggctttaacaaatctcatgctgct
gcctatggcttgattacttatacaacggcgtatctcaaagcaaattatcctaaagagtgg
cttgcggccttacttacctgtgattctgacgatattgagaaggtaggaaaactgattcga
gaagctcagagtatgggcattccgattcttcctcctcatatcaatgtctctagcaatcac
tttgtagctactgatgaaggcatacgctttgcgatgggagctattaaagggattgggcat
ggtttaattgagagcattgtagaagagagagatcatcatggtccttatgagagcatccgc
gactttatccagaggtctgatttaaaaaaagtttcgaaaaaaagtatagaaagtttaatc
gatgcgggttgttttgattgctttgattctaaccgagatttgctgttagcctctgtagag
cccctctatgaagctattgccaaagacaagaaagaggctgcatctggtgtgatgacgttc
tttactttaggagctatggatcgaaaaaatgaagtccccatttgtcttcctaaagacatt
ccgactcgctctaagaaagaacttttaaaaaaagaaaaagagctcttagggatttacctt
acagagcaccctatggataccgtgcgagatcatctttctcgtctttctgtagttctttct
ggagaatttgaaaatctcccgcatggttctgtagtccgcaccgtgtttattattgataaa
gtaacgactaaaatttcatcaaaagcgcaaaagaagtttgctgtccttcgtgttagtgat
ggcatcgattcttatgaactgccgatctggccagatatgtatgaagaacaacaagaactt
ctagaagaagatcgtcttatctatgctattcttgttttagataagcgcagtgattctcta
cgtatttcttgtcgctggatgaaagatctttctattgttaatgaaaacatcatttatgag
tgtgatcaagcttttgatagaataaaaaatcaggtgcaaaaaatgtcatttacaatgtca
acctctggcaaagaaactaaaactaaagggaataagcctaatgagaatgggcatacacaa
gctttagctcctgtgactctatctttagatctcaatgaactccgtcatagtcatctatgt
atcttaaagaagattgtgcaaaagcaccctggctcacggacattagttttagtttttact
caagataacgaaagagttgcctcgatgtctcctgacgacgcgtatttcgtttgtgaagat
attgaagaactccgtcaagaacttgtgactgctgaccttcctgtgcgtgtaattactgtt
tga
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integrated database retrieval system
