Chlamydia pneumoniae LPCoLN: CPK_ORF00178
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Entry
CPK_ORF00178 CDS
T01859
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clp
Chlamydia pneumoniae LPCoLN
Pathway
clp03420
Nucleotide excision repair
clp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPK_ORF00178 (pcrA)
03430 Mismatch repair
CPK_ORF00178 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clp03400
]
CPK_ORF00178 (pcrA)
Enzymes [BR:
clp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPK_ORF00178 (pcrA)
DNA repair and recombination proteins [BR:
clp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPK_ORF00178 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CPK_ORF00178 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACZ32661
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Position
1209992..1211911
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AA seq
639 aa
AA seq
DB search
MTCISELNEAQRKAVTAPLNPVLVLAGAGAGKTRVVTYRILHLINQGIAPREILAVTFTN
KAARELKERIVNQCASTNEFDVPMVCTFHSLGVFILRRSINLLNRENNFTIYDQSDAEKL
IKYALQQHNLKPNLASKIQAHISQAKNRLLFPEDLDPNDYIDPVVSIYQEYQKKLIEANA
LDFDDLLFLTVRLLRESPEAQELYNQLWKALLIDEYQDTNHAQYTLMQLLSKQHRNVFAV
GDPDQSIYSWRGANIHNILNFENDYPNAKVLCLEENYRSYGNILNAANALIKNNASRLEK
ELRSVKGPGEKIRLFLGSTDREEADFVAAEILQLHRVGNIKLRDICIFYRTNSQSRTFED
ALLRRRIPYEIIGGLSFYKRKEIQDILAFLRIFISKSDIVAFDRTVNLPKRGIGSTTIFA
LTQYAIAQGLPILKACQQALDTKDVKLSKKQQEGLQEYLALFPQIEHAYNTLSLRDFIES
VVRITGYLEILKEDADTFKDRKSNLEELYHKALESEQQNPKTHLELFLDDLALKGSDDDQ
NLTADRVNLMTLHNGKGLEFRVSFLVGLEEQLLPHANSLGGTYENIEEERRLCYVGITRA
QDLLYLTAAQVRSLWGTVRMMKPSRFLKEIPKDYMIQVR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtatctcagaacttaacgaagcacaacgcaaagctgtaacagctcctctcaat
cctgtactcgttctagcaggagcaggagcaggtaaaactcgtgtggttacctatagaatc
ttacacctaattaaccaaggcatcgcgcctcgagaaattctggctgtaacttttacgaat
aaagcagcgcgagaacttaaagaacgtattgtcaatcagtgtgcttccactaatgaattt
gatgttccgatggtgtgtacatttcatagtttaggagtttttattctccgacgttctata
aatctgctaaatcgtgaaaataattttactatttatgatcaaagtgacgcggaaaagctc
atcaagtatgccttgcaacaacacaacctcaaacctaatcttgcgagcaaaatacaagct
cacatctcacaagcaaagaaccgtttactctttcccgaagatttggatcccaatgactat
atcgatcctgtagtctcgatataccaagaataccaaaagaaacttatcgaagcgaatgct
ctggatttcgatgatcttctctttttaaccgtaagacttcttagagaaagtcccgaagca
caggaattatataaccaattatggaaagcattgctcatcgatgagtatcaagataccaac
catgcacaatatactttaatgcagctcctctcaaagcaacatcgcaatgtctttgctgtt
ggggatcctgatcagtctatctactcctggcgaggagcaaatattcacaatatcttaaat
tttgaaaacgattaccctaatgctaaagtcttatgcctcgaagaaaactaccgcagttat
ggcaatattctaaatgccgctaatgctctgattaaaaataacgcatcaaggttagaaaaa
gaattgcgtagcgtcaaaggacctggagaaaagattcgtcttttcctaggaagcacagat
cgcgaagaagcagactttgtcgctgcagaaattcttcaattacatagagtcgggaatata
aaactacgtgacatctgtattttctatagaacgaactcccaatctcggacatttgaagac
gctctacttcgcaggcgcattccctatgaaattatcgggggtctctccttctacaagcgt
aaggaaatccaagatatcctagcctttctccgtatctttatttccaaaagcgacatcgtt
gcttttgatagaactgtaaatctacccaaacgagggatcggttcaacaacgatatttgca
ctcacgcaatatgcaattgctcaaggtctccctatcctcaaagcatgccaacaagccttg
gatactaaagacgtcaaattatctaaaaaacaacaagaaggccttcaagagtatcttgca
cttttccctcaaattgaacatgcctacaatactctttcccttagagattttatagagtct
gtagttaggatcacgggttaccttgagatcttaaaagaagatgcggataccttcaaagat
cggaaaagcaatttagaggaactctatcataaagctttggaatccgaacaacaaaatcca
aagacacatttggaacttttccttgatgatcttgccttaaaaggctctgatgatgatcaa
aatttaactgcggatcgcgtgaatttgatgacccttcataatggaaaagggttggagttc
cgtgtatcatttcttgtaggtctagaagaacaattgcttccacatgcgaactctctgggc
ggcacttatgaaaatattgaagaagaacgacggttatgctacgtaggaattactcgagct
caagatctcctctatcttactgccgcacaagttcgcagcctctggggaaccgtacggatg
atgaagcccagtagatttttaaaggaaattccaaaagattatatgattcaagtgcgttag
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