Chlamydia pneumoniae LPCoLN: CPK_ORF00606
Help
Entry
CPK_ORF00606 CDS
T01859
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
clp
Chlamydia pneumoniae LPCoLN
Pathway
clp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPK_ORF00606 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clp03400
]
CPK_ORF00606 (uvrA)
DNA repair and recombination proteins [BR:
clp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPK_ORF00606 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPK_ORF00606 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
nSTAND1
AAA_16
AAA_29
AAA_21
DnaJ_CXXCXGXG
AAA_15
RsgA_GTPase
nSTAND3
Anti-TRAP
AAA_23
AAA_7
MeaB
Motif
Other DBs
NCBI-ProteinID:
ACZ33076
LinkDB
All DBs
Position
721257..726737
Genome browser
AA seq
1826 aa
AA seq
DB search
MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLP
TFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGGTTELFSHLALLFTLEGQA
RDPKTKEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKDIAAIHEYAQQGFTKVRCNGT
IHPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMT
FSTKQQIDDVTYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF
AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFDQTLGKK
NLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLCKGTGLGDYASVATWEGKTFA
EFQQMSLNNWHVFFSKVKSPSLSIQEILQGLKQRLSFLIDLGLGYLTPNRALATLSGGEQ
ERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMIS
LADRIIDIGPGAGIFGGEVLFNGKPEDFLMNFSSLTAKYLRQELTIPIPESREAPTSWLL
LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQENPKNLHFEG
GCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRSLRQGLTKAHFSFNQPQGA
CIQCQGLGTMTISDDDTPIPCSECQGKRYHSEVLEVLYEGKNIADILDMTAYEAEKFFIS
HPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTG
LHTHDIQALIEVLLSLTCLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK
DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNS
LIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGLLKETPLPSVGEVKGLSPVIS
VRKCSSSNRSYHTIASALGLSNGLEKLFAILGEPFSPLTEEKLSKTTPQTIIDSLLKSYK
DDYVTITSPIPLGTDLEIFLQEKQKEGFIKLYSEGNLYDLDETLPLSLIEPAIVIQHTKV
SPKNSSSLLSAISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH
PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSSTKPVQKLLKDENASKPL
KLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKPLLALTSCPACKGSGLNDYAN
YVRINNTSLLDIYQEDATFLESFLNTIGTDDTRSIIQDLMNRLTFISKVGLSYITLGQRQ
DTLSDGENYRLHLAKKISTNLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIAT
DRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA
NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQAELLIAK
GTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYASLTQAKALNISSTMFSTNTKQ
GQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVA
LRFPFIKKIQKPLKVLLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETSTLFLID
ELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF
SGSPKDIYASKDSLLKKYICNEELDS
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacttcctgtatatgtttctgggatcaaagttagaaatctaaaaaacgtttct
atccattttaactccgaggaaatcgttctactcacaggagtttcgggatcaggaaaatcc
tcgatagcctttgataccctatatgctgctggaagaaaacgctatatttcaacacttccg
acattcttcgctactacgataacgacgctgcccaatcctaaagtagaagaaattcatggt
ctctcaccaacaatagcaataaaacagaaccacttttcacactatagtcatgcgactgtc
gggggcactactgaacttttttcgcatcttgctcttctcttcacgctagaaggacaggct
cgagatcctaagactaaagaagtcttagatctctacagcaaggagaaagttcttagtacc
attatggagctctctgaaggtgtacagatctctattttagctcctctgctacgtaaagat
attgctgcaatccatgagtatgcacaacagggatttacaaaagtacgttgtaacggcacg
atccaccccatttactccttcctaacttcagggattcctgaagactgctctgttgatatt
gttattgatactctaatcaaaagtgaaaataatattgcaaggctcaaagttagcctattc
acagctttggaattcggagagggtcattgctcagttcttagtgacgaagagctcatgaca
ttctccacaaagcaacagatcgatgacgtcacctatacccctctaactcaacaattattt
tctcctcatgccctggagagccgttgctctctttgtcaaggatccgggatctttatttcc
atagataatccccttcttatcgatgaaaatctttcgattaaagagaattgctgtagcttt
gctggaaattgttcttcctatctctatcatactatataccaagctcttgctgatgcctta
aatttcaatttagaaactccatggaaagatctttccccagaaatccaaaatatttttctt
aggggaaaaaataacttggttcttcctgtacgactcttcgatcaaactttaggaaaaaag
aatctcacctataaagtatggagaggtgtacttaacgatataggagataaagttcgttat
accacgaagccctcacgttatctctccaaaggcatgtcagcacattcctgttccctatgt
aaaggtacaggcctaggagactacgcttccgtagctacttgggaaggaaaaacattcgct
gaattccaacagatgtctctaaataactggcatgtatttttttctaaggtaaaatctcct
tctctctctattcaagaaatcctgcagggactaaagcaaaggctctcttttcttattgac
ttagggctaggctacctcactccaaatcgcgcattagctaccctttctggaggagaacaa
gaacgtacagcaatagcaaaacacctaggaggagaactttttggaattacctatatccta
gatgagccctccataggcttgcatccacaagacactgaaaagctcatcggtgtcattaaa
aagctacgagatcaaggcaatacggtgattcttgttgagcatgaagaacggatgatttct
cttgcggataggattattgacatcggccctggagcaggaattttcggaggcgaggtcctc
tttaatggaaagcctgaggacttcctcatgaacttctcatctctgacagcaaaatacttg
cgtcaagagcttaccattcccattccagaatcccgggaagctcccacatcttggctcttg
ctaacagaagcaacgatccacaaccttaaaaatctttctattcgtctgccgttagctcgg
ctaatcggagttacaggagtctctggatcggggaaatcctctttaattaataatacgtta
gtgcctgctatagaaagcttcttgaaacaagagaaccctaaaaatctgcattttgagggg
ggatgcataggccgcttgattcacattacccgagatcttccaggacgctcacagcgttcg
atacctttgacctatattaaagcctttgatgatatccgggaactcttcgcctctcaacct
cgcagcctacgtcaaggactgacaaaagctcattttagcttcaaccaacctcaaggagct
tgtattcagtgtcaggggttaggaacgatgaccatctccgatgatgatacacccatcccc
tgttctgaatgccaagggaagcgttatcactcagaagtattggaagtcctctatgaaggg
aagaacatcgctgatattttagatatgacagcgtacgaagcagaaaaatttttcatttca
catcctaaaattcatgaaaaaatccatgctctatgttccctacgcctagattacctgccc
ttaggaagacctctttccacattatctggaggggaaattcaaaggctaaaactcgctcac
gagcttctctttgcttctcctaagcaaacactctatgtcctagatgaacctacgacaggc
cttcatactcatgatatccaagcactgatcgaggtccttctatccctcacatgtctaggg
cacacagtccttgttatcgaacataacatgcacgttgtcaaagtttgtgattatgttttg
gaattaggtcctgaaggaggagatctcggaggatacctcctggcatcctgcacccctaag
gatcttatccaactaaatactccaacagcaaaagcgttggccccctatattgaaggttct
ctagacataccggtagtaaaatctgaaccgccatcctctcctaaatcttgtgatatcctt
atcaaggatgcctatcaaaataatctcaaacacatagatcttgctcttccgagaaactcc
ctaatagcaattgcgggtcctggagcctcagggaaacattctttagtctttgatatactc
tatgcatcaggaaatatcgcttatgccgagctcttccctccctacattagacagggtctg
cttaaggagactcctctaccctctgtaggagaggtaaaaggactctctccagtcatttcg
gtaagaaaatgtagctcctccaatcgctcgtaccatacaatagcctctgctctcggatta
agcaatggtctggaaaagctctttgccatcttaggagaacctttttctccccttacagaa
gaaaaactctctaaaactacacctcagaccatcatcgatagcctactcaaaagctataaa
gacgattacgtcactataacctctccgattcctcttggtactgatctggaaatcttcctt
caagaaaaacaaaaagagggattcataaagttatattctgaggggaacctctatgattta
gatgagacgctgcctctaagtctcatagaacctgctatagtcatacaacatacaaaagta
tccccgaaaaatagttcctctttattatccgcaatctcggtagctttttctctatcttca
gaaatctggatctatatctctcagaaaaagcaacgaaaactctcgtattccttagggtgg
aaagataagaaagggagactctatcccgagattacacatcaactactttcttctgaccat
cccgagggtcgttgccttacatgtggaggtcgtggcgaaatcctgaaaatctccctagaa
gagcataaagaaaaaattgctcactacactcctttagagttttttagtttattctttcca
aagagctctacgaagcctgtacaaaagctgcttaaagatgagaatgcctctaaaccacta
aagttgctaactacgaaagagttcctaaatttttgccgaggttcctcagagtttccagga
atgaacgcactacttatggagcagctagatactgaatctgactctcccctgataaaacct
ctgcttgctcttacctcctgtcctgcctgcaaaggctcaggactaaacgattatgccaac
tatgtgcgaatcaacaatacctcgcttttggatatttatcaggaagatgccacattctta
gaatctttcctaaacactataggaaccgatgatacaagaagcataatccaagatttgatg
aatcgccttaccttcattagtaaagtaggcctgagctatattacccttgggcaaagacaa
gacactctcagtgatggtgagaactaccgtttacaccttgccaaaaagatctctacaaat
cttaccaacatcgtctacttattcgaagagcctctttctggactgcacccccaggatctt
cctaccatagttcagctacttaaagagctcgtagcaaataacaacacagtaattgctacc
gatcggtcctgttctttaatcccccatgccgatcacgcgatcttcttgggtccaggatct
ggacctcaaggaggatttctcatggattctgatactgaggtttgcccctctgtagaccta
cacgctaacgttccccaaactgaggtttgtcccaaggctccactttctataagtaaggca
aaccatacccgaggatccgatcgtacattaaaggtaaatctatcgatacaccatattcag
aatttgaaagtatcggctcctctccatgctttggttgccattggaggagtttcaggatct
gggaaaacctctctacttttagaaggatttaaaaaacaagctgagctcctgatagcaaaa
ggaactacaacattttccgaccttgtagtgatcgactctcatccaatagcttcatcgcaa
cgctctgatatcagcacctatttcgatattgctccttccttgagagctttttatgcttcg
ctaacacaagccaaagccctgaatatttcatctacgatgttcagtacaaatacaaaacaa
ggacaatgctcggattgccaaggacttgggtaccaatggatagatcgggctttttacgct
ttagaaaagcgtccctgccctacctgctcaggatttcgtatccaacctcttgctcaggaa
gtcctttatgaaggcaagcatttcggagaacttttgcatactccgattgaaactgtagcc
ctccgatttccctttattaaaaagatacaaaaacctctaaaagtacttcttgacatagga
ctcggctatcttcctatcggccaaaaactctcttccttatctgtaagtgaaaaaacagca
ctgaaaactgcttattttctctatcaaactccagagacttccaccctatttctcattgat
gagctcttttcttctctagatccaatcaaaaaacaacatcttccagaaaaacttcgctcc
ctcataaatagcggccactcggtaatctacatagatcacgatgtgaagttgttaaaatct
gcggactacctcatagagataggcccgggatctgggaaacaaggaggaaagcttcttttt
tcaggatctcccaaagatatctatgcaagtaaggactcgttgctgaaaaagtatatctgc
aatgaagaactcgattcttaa
DBGET
integrated database retrieval system
