Campylobacter lari CCUG 22395: UPTC4110_0265
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Entry
UPTC4110_0265 CDS
T03551
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clq
Campylobacter lari CCUG 22395
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clq03009
]
UPTC4110_0265
Enzymes [BR:
clq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
UPTC4110_0265
Ribosome biogenesis [BR:
clq03009
]
Prokaryotic type
ribosomal protein modification factors
UPTC4110_0265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AJD02850
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All DBs
Position
complement(229217..230533)
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AA seq
438 aa
AA seq
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MPKLFLMSLGCNKNLVDSEIMLGRLSDYEICDEPSIADVLIVNTCGFIDSAKKESINAIL
DLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDYEKIDEMILKKTNLFSNST
YLQDKNTNRVITGSNYHAFIKIAEGCNQKCSFCAIPSFKGKLKSRSLESIVNEVKELVKK
GYKDFSFIAQDTSSYLFDQGQKDGLLKLIEAIENIQGVKAARILYLYPTSISKEVIEKII
QSKVFVNYFDMPLQHISDNMLKIMKRGANKAKLIELLNLMKQAPNSFLRTGFIVGHPGES
DEDFEELCAFIKEFGFDRISVFAYSKEEDTAAFDMEQIPSKIINARLKVIEKIVDDCIEK
SFNQQVGKKTLAFCEGQSSEGEFFIGAKDLRWDRNIDGEILINESDCGDLEMGELYECEI
TQSLDKKLIAKALRKFDD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaactttttttaatgtctttaggttgtaataaaaatttagttgatagcgaaatc
atgcttggaagattaagtgattatgaaatttgtgatgagccaagcatagctgatgttttg
attgtaaatacctgtggctttatagatagtgctaaaaaagaaagcataaatgcgatttta
gacttacacgagcaaagaaaaaaagactcgttgctggttgtaacaggatgtttgatgcaa
cgctaccgcgaggaattaatgaaagaactacctgaagttgatctttttaccggtgtggga
gactatgaaaaaattgatgaaatgatacttaaaaaaactaatctattttcaaattccact
tacttgcaagataaaaataccaatcgtgtaatcacaggatcaaattatcatgcttttatc
aaaatagctgaaggatgtaatcaaaaatgttcattttgcgccataccaagctttaaagga
aaactcaaatcaagaagcctagaaagcattgtaaatgaagtaaaagagcttgttaaaaaa
ggctataaagacttttcttttattgctcaagatacaagttcgtatttgtttgatcaaggt
caaaaagatggacttttaaagcttattgaagctatagaaaatatccaaggtgtaaaggct
gctagaattttatatctatatccaacaagtattagcaaagaagtgatagaaaaaatcatt
caatcaaaagtttttgtaaattattttgatatgcctttacaacacatcagtgataatatg
cttaaaatcatgaaacgcggagctaacaaagctaaattaatcgaacttttaaatttaatg
aaacaagctccaaattcatttttacgcacaggttttatagtaggacaccctggagagagc
gatgaggactttgaagaattatgcgcttttataaaagaatttggttttgatagaattagt
gtttttgcttattctaaagaagaagataccgcagcttttgacatggaacaaattcctagt
aaaatcattaatgcgagattaaaagtgatagaaaaaattgttgatgattgcatagaaaaa
agttttaatcaacaagttggtaaaaaaactttagcattttgtgaaggtcaaagctctgaa
ggagaatttttcatcggtgcaaaagatttgcgttgggatagaaatattgatggagaaatt
ctcatcaatgaaagcgattgtggagatttagaaatgggtgagctttatgagtgtgaaatc
acgcagagcttagataaaaaactcattgcaaaagctttaagaaagtttgatgattga
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