Campylobacter lari CCUG 22395: UPTC4110_0354
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Entry
UPTC4110_0354 CDS
T03551
Symbol
fdhF
Name
(GenBank) formate dehydrogenase N, alpha subunit, selenocysteine-containing
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq00630
Glyoxylate and dicarboxylate metabolism
clq00680
Methane metabolism
clq01100
Metabolic pathways
clq01120
Microbial metabolism in diverse environments
clq01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UPTC4110_0354 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
UPTC4110_0354 (fdhF)
Enzymes [BR:
clq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
UPTC4110_0354 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
AJD02937
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Position
324956..327778
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AA seq
940 aa
AA seq
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MALARRNFLKLAGIAGLGSAAFGSENKAIRAASEQEVANPYPDSKIVRTICSICSAGCGI
KAEVQDGVWVRQENAIEHPISQGSHCCKGIDQIDLTKSKQRIKYPMKKENGKWVRLTWEQ
AINEIGDKMLEIRKENGPDSVMFLGSAKFNNQQAYYFRKFAAFWGTNNIDHVARIUHSAT
VAGVANTWGYGAMTNHFGDVTKHSKMMIIFGANTAVANPIGFKHLLQAKDRNNAKLVVVD
PVFTKTAVHADEYVRIRPGTDIALVYGMLHLIFKNGWEDKELIKTRTYGVEEIKAEAAKW
TPEVVEDVTGVPAAQLEKITRMLATIKPATLFWALGITQHSVGSSNTRILAILQLVLGNI
GKPGAGTNIIRGHDNVQGATDMGCLADTLPAYYGLDDNAWNHFSNVWNVEREYLNSRFYS
KEWMHEKGFSLAKWWQGVLHEEKTYSNSPIRVLWVQGTGITSMAHTVKIQEALKKLDMIV
IAEPFVNEVAVLADRPDGIYIIPASTQFETEGYVTATNRAMQWRSQVVKPIYESKEDQEI
MFAFAKKFGFYKEYTRGMKMELKDHKLVQTRDDNDDNFIWPDDATREMSNGLLSIGLRGI
SAERLRKHQQNWEHFDPDTQRGIGGEVKGEYYGLPWPCWDKQHPGTSIMWNTDIPYEEGG
MGFRNRFGLEHDGHSQLADETFTPKGCKVKGGYPQITKENIEKVFNIKLSDKEKELMGAS
WSTDISGIILEKCREKSACCLGNARARMKVWEFADPIPLHREPIHSPRWDLVKKYPTWGD
QEKNFRVESKFISEQQKTDWSKEFPTIISSMRLVNLSGAGMLERTSKYLAAITPEMFANV
HPELALKYGINDGDMMWIHSPQGTKIKVKCVHNHSVTPDRICLPYNFAGIMQGVDLSYNY
PEGTKPYTIGESSNTVTNYGFDINTQISEFNAGLCRLEKA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcattagcaagaagaaattttcttaagcttgctggtattgctggtcttggaagtgcg
gcttttggtagtgaaaacaaagctattagagctgcaagcgaacaagaagtagcaaatcct
tatccagattctaagattgttagaacaatctgtagtatctgtagtgcaggctgtggaatt
aaagcagaagtacaagatggagtttgggtgcgtcaagaaaacgctatagaacatcctatt
tctcaaggatcacactgctgtaaagggatagatcaaatcgatcttactaaatcaaaacag
cgtattaaatatcctatgaaaaaagaaaatggcaaatgggtacgtttaacttgggaacaa
gctatcaacgaaattggcgataaaatgcttgaaatccgtaaagaaaatggacctgatagc
gttatgtttttaggttcggctaaatttaataaccaacaagcttattattttagaaaattt
gcagcattttggggtactaataatatagaccacgttgctagaatttgacacagcgcaaca
gtcgccggtgtggcgaatacatggggttatggcgctatgacaaatcattttggtgatgtg
actaaacattcaaaaatgatgattatttttggtgcaaatactgctgtggctaatcctatt
ggatttaaacacttattgcaagcaaaagatcgtaataatgctaaattagtagttgtagat
cctgtatttacaaaaactgcagtgcatgctgatgaatatgtgagaattcgtccaggtaca
gatatagctttagtttatggtatgcttcatttgatcttcaaaaacggttgggaagataaa
gaattaatcaaaactagaacttatggggttgaagaaataaaagcagaggctgctaaatgg
actcctgaagttgtagaagatgtaacaggtgttccagctgctcaacttgaaaaaatcaca
agaatgttagctacaattaaacctgctacgctattttgggctttaggtattactcaacac
tcagtaggtagctctaatacaagaattctagctatcttgcaactcgttcttggtaatata
ggcaaaccaggcgcaggaacaaacatcatcagaggtcatgataatgttcaaggtgctact
gatatgggttgtttggcagatactttaccagcttattatggacttgatgataatgcttgg
aatcatttttctaatgtatggaatgttgagagagagtatttaaattcaagattttattct
aaagaatggatgcatgaaaaaggcttttcgctagcaaaatggtggcaaggcgttttacat
gaagaaaaaacttattcaaactcacctatccgtgtactttgggtgcaaggaacgggtatt
acttctatggcacatacggtaaaaattcaagaagcacttaaaaaacttgatatgatcgta
attgctgagccttttgtaaatgaagtagcagttttagcagatcgtccagatggtatttat
attattcctgcttcaacccaatttgaaacagaaggttatgtaacagcgactaaccgtgct
atgcaatggcgttctcaagtagtaaaaccaatttatgaaagtaaagaagaccaagagatt
atgtttgcttttgctaaaaaatttggtttttataaagaatacactcgtggcatgaaaatg
gaattaaaagaccataaacttgtacaaacaagagatgataatgatgataatttcatatgg
cctgatgatgccacaagagaaatgagcaatggtcttttaagtataggtttaagaggtatt
tcagctgaacgtctaagaaaacaccagcaaaattgggaacattttgatcctgatactcaa
agaggtattggtggtgaagttaaaggtgaatattatggcttaccttggccttgttgggat
aaacaacacccaggcacttctatcatgtggaacacagatattccttatgaagaaggtggt
atgggctttagaaatcgctttggtttagagcatgatgggcattctcaattagcagatgaa
acttttactccaaaaggatgtaaagttaaaggtggctacccacaaattactaaagaaaat
atcgaaaaagtatttaatatcaaactaagcgataaagaaaaagaattaatgggcgctagc
tggagcacagatatttcaggtattatcttagaaaaatgtagagaaaaaagtgcttgttgt
ttaggtaatgcaagagctagaatgaaagtttgggaatttgctgatcctatcccactacat
agagagcctattcactcgcctcgttgggatttggttaaaaaatatcctacttggggtgat
caagagaaaaactttagggttgagagtaaatttattagcgagcaacaaaaaacagattgg
agtaaagaatttccaactattatttcaagtatgcgtttagtaaatttaagcggtgcgggt
atgcttgagagaactagtaaatatcttgccgcaatcacacctgaaatgtttgctaatgtg
caccctgaacttgctttaaaatatggtataaatgatggtgatatgatgtggattcattca
ccacaaggcactaagattaaagtaaaatgcgtgcataatcattcagttacaccagataga
atttgcttgccttataattttgcaggtattatgcaaggtgtggatttaagttataattat
cctgaaggtactaaaccttatactataggggaaagttctaacacggttactaactatggt
tttgatataaatacgcaaatttctgagtttaatgcaggactttgcagacttgaaaaggct
taa
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