Campylobacter lari CCUG 22395: UPTC4110_0512
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Entry
UPTC4110_0512 CDS
T03551
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UPTC4110_0512 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clq03019
]
UPTC4110_0512 (pnp)
03016 Transfer RNA biogenesis [BR:
clq03016
]
UPTC4110_0512 (pnp)
Enzymes [BR:
clq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UPTC4110_0512 (pnp)
Messenger RNA biogenesis [BR:
clq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UPTC4110_0512 (pnp)
Transfer RNA biogenesis [BR:
clq03016
]
Prokaryotic type
tRNA degradation factors
UPTC4110_0512 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
AJD03083
LinkDB
All DBs
Position
484722..486830
Genome browser
AA seq
702 aa
AA seq
DB search
MRHEININNHLEIFDTDKVAKQAAGAILMQEKNAVVLATVAREEKMVEEDFLPLTVQYIE
KAYAAGKIPGGYVKRETKPGDNETLSARIIDRSLRPLFPKGYAYPTQIVVMVLSADPEVD
LQVMSLNAASIALYLSDIPIKAPVCGVRIGRINNEFVLNPSNSELKNSTLDLYVAGVKDE
LLMIEMRALANKQNNKHCVNELSEDDTLKALDFASNAILRGSNEYEKTFAAYRKNSKLEF
KIELDNAQIIDYIKNTYMTKLKIAINQMAKSERASEILQIAKEIESETIAIENEWKFEDI
EKALHVCKRELIRNQIINENKRADGRGLKDVRKIDIETNILPSAHGSCLFTRGQTQALVV
TTLGNDNDAQMSDLLTEKNPICEKFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRAL
HPSVDVDYAHTIRLVSEILESNGSSSMATVCGGALALRAAGVKSEKLVAGVAMGLVFEDE
KYAILTDIMGLEDHDGDMDFKVAGSYEGITALQMDIKLGGIEQQVLKEALYQAKEAREHI
LKLMEEADRSIIVNEAILPKIEIFNVDPNKIPDIIGQGGKTIKEIIEKFEVNIDLDRDKG
EVKIAGINHDLISQSKEYILNLLHSKGSNKKRDRKEMPKFDIGEEFVGKVQKVVEFGVFV
ELKEGVDGLLHNSKIKEKLEVGNEIKVKVAEIKNGKVSLDLA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatgaaataaatatcaataatcatcttgaaatatttgataccgataaagtagca
aaacaagctgctggtgcaattttaatgcaagaaaaaaatgcagtagtcttagcaactgta
gcaagagaagaaaaaatggtagaagaggattttttacctcttacggtacaatatatagaa
aaagcctatgcagcaggtaaaattccaggtggctatgtaaaaagagaaaccaaaccaggt
gacaatgaaacactaagcgcaaggattatagatagaagtttaagacctctttttccaaaa
ggctatgcttatccaacgcaaattgttgtgatggttctttctgctgatcctgaagtggat
ttacaggtgatgagtttaaatgctgcaagtattgctttatatttaagtgatattcctatc
aaagcaccagtttgtggtgtaagaataggtcgtataaataatgaatttgttttaaatcca
agcaatagtgagctaaaaaatagcaccctagatctttatgtagcaggtgttaaagatgag
cttttaatgatagaaatgagagctttggcaaataagcaaaacaacaaacattgtgtgaat
gagttaagtgaagatgatactttaaaagctttagattttgcaagtaatgcaattttacgt
ggttccaatgaatatgaaaaaacatttgctgcttatagaaaaaattccaaacttgagttt
aaaatagagctagataatgctcaaattattgactatataaaaaatacttatatgacaaaa
cttaaaattgctattaatcaaatggcaaaaagtgaaagggcaagtgaaattttacaaatt
gcaaaagaaattgaaagcgaaacaatagctattgaaaatgaatggaaatttgaagatatt
gaaaaagctttgcatgtatgtaaaagagaacttattagaaaccaaattattaatgaaaat
aaaagagcagatggtagaggtttgaaagatgttaggaaaatagatatagaaacaaatatt
ttaccaagtgctcatggatcttgtctttttactagaggacaaacccaagctttagttgtt
acaactttaggaaatgataatgatgcgcaaatgtcagatttgctaacagaaaaaaatcca
atttgtgaaaaatttatggttaattataattttccggggttttctgtgggtgaggctagt
cctataaaagctcctggtagaagagaactagggcatggaaatttagcaaaacgagctttg
catcctagtgtggatgtagattatgctcatactattcgtttggtgtctgaaattttagaa
agtaatggttctagttctatggctactgtttgcggtggtgctttagctttaagagctgca
ggagtaaaaagtgaaaaactagtagcaggtgtggcaatggggcttgtttttgaagatgaa
aaatatgctattttaaccgatatcatggggcttgaagatcacgacggagatatggatttc
aaagtggcaggaagttatgaagggatcactgctttgcagatggatataaaacttggtggt
atagagcaacaggttttaaaagaagctttatatcaagcaaaagaagctagagaacatatt
ttaaaactaatggaagaagctgatagaagcatcattgttaatgaagctattttaccaaag
attgaaatttttaatgtagatccaaataaaattcctgatattataggtcaaggcggtaaa
actataaaagaaatcatcgaaaaatttgaagttaatatcgacttagatagagataaaggt
gaagttaagatagcaggaattaatcatgatttaatttctcaaagcaaagaatatatatta
aatttactccattctaaaggttctaataaaaaacgcgatagaaaagaaatgcctaaattt
gatatcggagaagaatttgtaggaaaagttcaaaaagttgtagaatttggagtttttgta
gaacttaaagaaggcgtggatggtttattacataattctaagattaaagaaaagttagaa
gtaggtaatgaaattaaagttaaagttgcagaaattaaaaatgggaaagtttctttagat
ttagcctaa
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