Campylobacter lari CCUG 22395: UPTC4110_0528
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Entry
UPTC4110_0528 CDS
T03551
Name
(GenBank) putative helicase, PIF1 family (DUF889 domain)
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clq
Campylobacter lari CCUG 22395
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clq03032
]
UPTC4110_0528
03029 Mitochondrial biogenesis [BR:
clq03029
]
UPTC4110_0528
Enzymes [BR:
clq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
UPTC4110_0528
DNA replication proteins [BR:
clq03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
UPTC4110_0528
Mitochondrial biogenesis [BR:
clq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
UPTC4110_0528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Viral_helicase1
AAA_22
AAA_24
SH3_13
UvrD_C_2
PhoH
AAA_5
nSTAND3
AAA_16
AAA_11
AAA_14
NTPase_1
IstB_IS21
DUF815
TrwB_AAD_bind
RsgA_GTPase
AAA_25
Helicase_RecD
AAA_18
MeaB
Motif
Other DBs
NCBI-ProteinID:
AJD03085
LinkDB
All DBs
Position
495578..496921
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AA seq
447 aa
AA seq
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MNLVVENLRSFLKNNNVFLTGGAGVGKSFLTMELIRSYRVQGKIVIVLGSTALSAFNIGG
VTLHSFFAFKRCQNYDELYYEDRKQKDKLEKLKRILKQCDLLVIDEISMVSASLMEMIYY
RLTRSGFNGKILLAGDFFQLPPVVKHKENQNQNTLFQNTLYAFSSQAWNDLKFINLKLSV
TKRTLDKQFYEYLFFLRMGEVNKEMLNFFKKMLISSKNLLEYMDEYTLLCATNKKTNYIN
TEKLNLLRGKESIFKAKAEKLDYTLDDKTYEQWINGLNSLGELKLKIGAKIIFCVNNKEE
NYYNGEQGVVLDFIKDKEQECILIEKNNGERLKLKPYEYTLEEYELDKDEKLEVKIKAKF
VQFPIKLAYAITIHKSQGMSIDKLICDIDGIFEKGQLYVCLSRAINPSNLKIVYNYKMPF
EDYFLKILKFDKEVKQFYLQEKFVNLE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttggttgtagagaatttaagatcttttttaaaaaataataatgtatttttaact
ggtggtgcaggtgttggtaagtcttttttaactatggagcttataagatcttatagagtt
caaggaaaaattgttattgtattgggttctactgcacttagtgcttttaatataggaggg
gttactttacatagtttttttgcttttaaaagatgtcaaaattatgatgagttgtattat
gaagataggaagcaaaaagataagctagaaaaattaaagagaattttaaaacaatgtgat
ttattggttattgatgaaatctctatggtaagtgcttcattgatggaaatgatttattat
agattaacaagaagtggttttaatggtaaaattttattggctggagatttttttcaactt
ccacccgtggttaagcataaagaaaatcaaaaccaaaatactttatttcaaaatacttta
tatgctttttcttcgcaagcttggaatgatcttaaatttattaatctaaaacttagcgtt
acaaaaagaactttagacaaacaattttatgaatatttgttttttcttagaatgggtgag
gtaaataaagaaatgctaaatttctttaaaaaaatgttaattagttcaaaaaatttactt
gaatatatggatgaatatactctattatgtgccacaaataaaaaaactaattatattaat
actgaaaaattaaatcttttacgaggtaaagaaagtatatttaaagcaaaagctgaaaaa
ctagattatacattagatgataaaacttatgagcagtggattaatgggcttaattctttg
ggtgaattaaaattaaaaataggcgctaagattattttttgtgtgaataataaagaagag
aattattataatggggagcaaggtgttgttttagattttataaaagataaagagcaagaa
tgtattttaatagaaaaaaataatggtgaaagattgaaattaaaaccatatgaatatacc
ttagaagagtatgagttagacaaagatgaaaaactagaagttaagataaaagctaaattt
gttcaatttcctataaaactagcttatgctataacaatccataaatctcaaggtatgagt
atagataaattaatatgtgatattgatggaatttttgaaaaaggacaattgtatgtatgt
ttatcaagagctattaatccaagtaatttaaaaatcgtatataattataaaatgcctttt
gaggattattttttaaaaattttaaaattcgataaagaggtaaaacaattttatttacaa
gaaaagtttgtaaatttagaataa
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