Campylobacter lari CCUG 22395: UPTC4110_0561
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Entry
UPTC4110_0561 CDS
T03551
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UPTC4110_0561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_0561
Enzymes [BR:
clq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UPTC4110_0561
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UPTC4110_0561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
IDEAL
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJD03117
LinkDB
All DBs
Position
528729..529340
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AA seq
203 aa
AA seq
DB search
MNKRSLYYLKAFGYEYFNEQKQIRHFNLSFKELNERVKTCNLCHFSKLRKHSLMEKEAKN
AKILIYQAFIDKEENESGKFFASKNKQEFLRLCKELLNLKEDEIYFSYMFKCFSNFKIDE
QALKLCLPYFYNELDFVKAKIILCLGQEAFASLGFENFQKYKGQCMRFNNALLLPSYDLN
FVSKNPSFYTEFIEDIKKIKGYL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgcagtttgtattatttaaaagcttttggttatgaatactttaatgagcaa
aagcaaattaggcattttaacttaagctttaaagaattaaacgaaagagtgaaaacttgc
aatctttgtcatttttctaaattaagaaagcatagtttaatggaaaaagaagccaaaaat
gctaaaattttgatttatcaagcctttatcgataaagaagaaaatgaaagtggaaagttt
tttgcttctaaaaataagcaagagtttttaagattatgtaaagagcttttaaatttaaaa
gaagatgaaatatatttttcttatatgtttaaatgttttagtaattttaaaatagatgaa
caagcattaaaattatgcttaccatatttttataacgagcttgattttgtaaaagcaaag
attattttatgtcttggtcaagaagcttttgcgagtttgggttttgagaattttcaaaaa
tacaaagggcaatgtatgcgttttaataatgctttgcttttgccaagttatgatttgaat
tttgtgagtaaaaatcctagcttttatactgaatttatagaagatattaaaaaaataaaa
ggttatttatga
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