Campylobacter lari CCUG 22395: UPTC4110_0640
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Entry
UPTC4110_0640 CDS
T03551
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
UPTC4110_0640 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clq02000
]
UPTC4110_0640 (msbA)
Enzymes [BR:
clq01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
UPTC4110_0640 (msbA)
Transporters [BR:
clq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
UPTC4110_0640 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
SbcC_Walker_B
AAA_22
DEAD
AAA_29
AAA_16
Trm56
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AJD03191
LinkDB
All DBs
Position
complement(605674..607437)
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AA seq
587 aa
AA seq
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MDKNYKEMKLKEVFTRFKPYYKDYWFYFVLAIIGMLLTSGGTAASAYIIEPILNKIFIEK
NVDLLYYMPLLVVLIYTLKNLGAYMQVYYISYVGTDILRRLRELVLGNLLRLDMSFFHKY
RNGELISRCTSDIGALQNIVSTIIPEILRESLTAIGLLSVVIYQSPKLAFFALVILPLAI
YPLAIFAKKIKKIGRNTQEKNSDLTSRLSEIFSNIELIKASNASKNEMQKFSQTNSEVCK
LSLKGIRIEALSSPLMESMGSIGFAIVIIIGGKEVIDGSLSIGSFFSFTTALFMAYTPIK
RLSSLYTRLQNAVAASERTFYLTDLEPQIKGGDEKLTENIQNIHFKNVSLSYQKDKMVLK
GVNFSFNKGEILALVGSSGGGKSSIINLLMYFFEKDSGAILINQKDISSFNIVSLRENIS
LVTQNIYIFNDTIAQNIAYAKEYDEARVIEVLKQANAYDFVQELGGIHTELKEHGKNLSG
GQKQRIAIARALYKNPQILIFDEATSALDNESEKAIVKTIENLKKDRLILIIAHRLSTIE
NADKIAVLDKGKIASIGNDAYLMQHCEIYQKLKQKVQKTDKDKENEN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaattacaaagaaatgaagcttaaagaggtatttactcgctttaagccttat
tataaagattattggttttattttgttttagctattataggtatgcttttaactagtggc
ggaacagctgctagtgcatacatcatagagcctattttaaataaaatttttatagaaaaa
aatgttgatttgctttactatatgcctttacttgttgttttaatttatactttaaaaaat
cttggcgcttatatgcaagtttattatatatcttatgttgggacagatattttaagaaga
ttaagagaattagttcttggtaatcttttgcgcttagatatgagcttttttcataaatac
agaaatggagaattaatcagcaggtgcacttctgatattggagctttgcaaaatatagtt
tctactatcatacctgaaattttaagagaaagtttaactgccattggacttttaagtgtt
gtaatttatcaaagcccaaaacttgctttttttgctttagtaattttacctttagcaatt
taccctcttgctatttttgctaagaaaatcaaaaaaataggacgcaatacccaagaaaaa
aattccgatcttacttcaagattgagtgaaattttttctaatatagaacttatcaaagct
tctaatgcaagtaaaaatgaaatgcaaaaattcagccaaactaatagcgaagtttgcaaa
ctttccttaaaaggcattagaattgaagctttaagtagccctttaatggaatctatgggt
tcaattggttttgcaatagtaattataataggtggtaaagaagtaatcgatggaagttta
agtataggttctttttttagctttactacagctttatttatggcttatactcctattaaa
agactttcttcactttacacaagattacaaaatgcagtagcagcaagtgaaagaactttt
tatctaactgatttagaaccacaaattaaaggtggcgatgaaaaacttacagaaaatatt
caaaatatccattttaaaaatgtctctttaagctatcaaaaagataaaatggtattaaaa
ggtgtaaatttttcttttaacaaaggagaaattctagccttagttggatcaagtggtgga
ggaaaatcttctattattaatcttttaatgtatttttttgaaaaagatagtggtgcaatc
ttaatcaatcaaaaagatattagttcttttaatattgttagcttaagagagaatatctct
ttggtaactcaaaatatttatatatttaatgacactatagctcaaaatatagcttatgct
aaagaatacgatgaagcacgtgtaatagaggttttaaaacaagctaatgcttatgatttt
gttcaagagcttggcggtatacatactgaattaaaagagcatgggaaaaatctctccggt
gggcaaaaacaacgcattgctatagcaagggctttatataaaaatcctcaaattttaatt
tttgatgaagcaacctcagcacttgataatgaaagtgaaaaagccatagtaaaaactata
gagaacttaaaaaaggatcgtttgatactcatcatcgctcatagacttagcactatagaa
aatgctgataaaattgctgtacttgataaaggaaaaatagcttctataggaaatgatgct
tatttaatgcaacattgtgaaatttatcaaaaattaaaacaaaaagtacaaaaaactgac
aaagataaagaaaatgaaaactaa
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