Campylobacter lari CCUG 22395: UPTC4110_0802
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Entry
UPTC4110_0802 CDS
T03551
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03420
Nucleotide excision repair
clq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UPTC4110_0802 (rep)
03430 Mismatch repair
UPTC4110_0802 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_0802 (rep)
Enzymes [BR:
clq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UPTC4110_0802 (rep)
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UPTC4110_0802 (rep)
MMR (mismatch excision repair)
Other MMR factors
UPTC4110_0802 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
Churchill
Motif
Other DBs
NCBI-ProteinID:
AJD03348
LinkDB
All DBs
Position
760039..762066
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AA seq
675 aa
AA seq
DB search
MPLSRLNEEQYKAASAPFGYNLIIASAGTGKTSTIVARIAFLLQNGIKPEKIMLLTFTNK
ASKEMIERLGKYFDKSITSKITAGTFHSTAYSLLKELNHDIILKPASELKILLRSIFEKR
TFHHLSDTKPYMPSYLYDVYSLFQNTNANLDEFYNWFCQNYDEQAVYAEIYEDILKEYEE
EKARFNYVDFNDLLIKLKHVLASHHFEFDEILVDEYQDTNTLQGSLIDAFKSKSLFCVGD
YDQSIYAFNGADISIIGSFKDRFVDANIFTLNKNYRSSKNILALANKVILNNERLYPKEL
IVTREGDFKAPSLLTFNELFDQYSTIAKIILQSGVNLDEIAVIFRNNSSADGVEVALREL
GIASKRKGGGSFFESLEVKNFCSMLAIALNPKDIMAFIHLLEYTKGVGGVLAKDIFDALL
KLGHSSLIKGFLNPDSSVSLKKYKKQSYQLGLFDDIEELALPSRFNLESEFNTHPILSLP
KINEFCAKNLEKIYLFIKKASECKVSTQLVNLILENDYFKEICDILATKRATNKNSNVDL
NKKSEILEKINAKMFVLKELAKNYSDNYKYYNFLTLGASEMSSGSGVNLLSIHASKGLEF
ELVFVIDLAQGRFPNQKLMSMGGSLEEERRLFYVAVTRAKDTLYLSYAKYDKIKKSNYQP
SCFLIEAGMCKEEQK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcccttatcgcgtttaaatgaagaacaatacaaagccgctagtgctccttttggatac
aatcttatcatagcaagtgcaggcacgggtaaaacttcaaccatagttgcaagaatagcc
tttttacttcaaaatggtataaagcctgaaaaaattatgcttttaacctttacaaacaaa
gctagtaaggaaatgatagaaagacttggtaaatattttgataaaagcattacttcaaaa
atcacagcaggaacctttcatagcactgcttattccctacttaaagagttaaatcatgat
attattttaaaacctgcaagtgagcttaaaattcttttacgttccatttttgaaaaacgt
acttttcatcatctaagtgatactaaaccttatatgccaagttatttgtatgatgtgtat
tctttatttcaaaatactaatgcaaatttagatgaattttataattggttttgtcaaaat
tatgatgaacaagctgtttatgctgaaatttatgaggatattttaaaagaatacgaagaa
gaaaaagcacgttttaattatgtggattttaatgatttattgatcaaattaaaacatgtt
ttagcttcacatcattttgaatttgatgagattttagtagatgagtaccaagatactaat
actttacaaggttcattaattgatgcttttaaaagtaaaagtttattttgtgtgggtgat
tatgatcaaagtatctatgcttttaatggggctgatatttctattataggaagttttaaa
gatagatttgtcgatgcaaatatttttactttaaataaaaactatcgttctagtaaaaat
atacttgcactagctaataaggttattttaaacaatgaaagattatatcctaaagaatta
attgtaactagggaaggagattttaaagcaccaagtttactaactttcaatgaattattt
gatcaatactctaccatagcaaaaataatcttacaaagtggagttaatcttgatgaaatt
gctgttatttttagaaacaattctagtgcagatggagtagaagttgccttaagagaactt
ggtatagcaagcaaaagaaaaggtgggggaagcttttttgaaagcttggaagttaaaaac
ttttgctctatgcttgcaatcgcgcttaatccaaaagatatcatggcttttatacacttg
cttgaatacaccaaaggagttggtggggttttagcaaaagatatttttgatgctttatta
aaactggggcattctagtttgattaaaggctttttaaatcctgatagtagtgtgagttta
aaaaaatacaaaaagcaaagttaccaactaggactttttgatgatattgaggagctagcc
ttgccttcaaggtttaacttagaaagtgaatttaacacccaccctattttaagccttcct
aaaattaacgagttttgtgcgaaaaatcttgaaaaaatttatctttttattaaaaaagca
agtgagtgtaaagtttcaactcaacttgtaaatttgatcttagaaaatgattattttaaa
gaaatttgtgatattttagcaaccaaaagagcgactaataaaaactccaatgttgactta
aataaaaaaagtgaaattttagaaaaaatcaatgcaaaaatgtttgtattaaaagaactt
gctaaaaattacagtgataattataaatattataattttcttactcttggcgctagtgaa
atgagtagtggtagtggggtcaatcttttaagcatacatgctagtaagggacttgagttt
gagcttgtatttgtaattgatcttgcacaaggaagatttcctaatcaaaaactcatgagc
atgggtggaagtttagaagaagaaagaagacttttttatgtagctgtaactagagctaag
gatactttatacttaagctatgcaaaatatgacaagattaaaaaaagcaattatcaacct
tcatgttttctaatcgaagcaggtatgtgcaaagaagaacaaaaataa
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