Campylobacter lari CCUG 22395: UPTC4110_0867
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Entry
UPTC4110_0867 CDS
T03551
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03030
DNA replication
clq03430
Mismatch repair
clq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UPTC4110_0867 (dnaE)
03430 Mismatch repair
UPTC4110_0867 (dnaE)
03440 Homologous recombination
UPTC4110_0867 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clq03032
]
UPTC4110_0867 (dnaE)
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_0867 (dnaE)
Enzymes [BR:
clq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UPTC4110_0867 (dnaE)
DNA replication proteins [BR:
clq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UPTC4110_0867 (dnaE)
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UPTC4110_0867 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
CERK_C
Motif
Other DBs
NCBI-ProteinID:
AJD03412
LinkDB
All DBs
Position
complement(832247..835840)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSQFTHLHLHTEYSLLDGANKLKELAKTLKAQGATSVAMTDHGNMFGAIDFYKTMRAEGI
KPIIGLEAYLHNHDDLSDKSSRQRFHICLFAKNEIGYKNLMYLSSQSYIHGLYYYPRINK
KLLEAHSEGLICSSACLQGEVNWHLNTKNERNLKFGAKGYEGAKEAALWYKKVFGDDFYL
EIMRHGIDDQKFIDDSIIKLAKELDIKIIATNDTHYTFKERAAAHEVFMCIAMGVKLDDP
GRLRHEVHEFYVKTPEQMSELFADIPEAIENTQEIANKCNLELKLGDPTPPNFKFTREYA
KKYGLSLSQEDQEFSFDNDDIVFEYLCKKGLEERLQFIDESKHQEYKDRLDLEISIIKNM
KFSGYMLIVHDFIAAAKEKDIPVGPGRGSAAGSLVSYCLKITDLDPIPYNLLFERFLNPE
RVSMPDIDVDFCQDRRGEVIDYVIDKYGAEKVAQVITFGKLLAKGVIRDVARVCDMSIPD
ADALAKLVPEELKITLEKAYEQEPKIAEFVNSHPKGRQVWDFAKALEGLNRNAGMHAAGV
VISNEALWNKAPLFRQSKNDERHLVTQYSKEYLEDVDLIKFDFLGLKTLTVIDNAIKLVK
KRYGKDVIWEKIDMNDPKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDLIAVLAL
YRPGPLDSGMVDDFIDIKHGRKAATYAFEDLKPILENTYGVIVYQEQVMQIVQKIGGFSL
GGADNVRRAMGKKKREILDNLKAEYLEGAKKQGYDEKKADDLFELILKFAEYGFNKSHSA
AYALITFQTAYLKTYYPSEFMAALLTSEESNVDKVAKYIEEMKRMNIKLLPPSINKAQRE
FSATKLDDGSEAIIYGLGAIKSVGIPAIENIMAIRKEEGFSDFDDFISSIDPTKINKKTI
ENLAKSGAFDEFGYTRKCLVDNLELISETSRKIAEVKRNSTASLFGEEEIAADIKVGLHD
SKIEFELMEKLGYEKEILGIYVSGHPLDKFASQIEGIEYFKSMDFETLKGEGELLVVGKI
EDFKSMMSKSGKRYAKAVVLDFYSTFDMIIFEAQVEKVEALFKESKDETFAFLLRYKNND
NDLSFSLNEIYTLEEAKENELKSFSKKKSFAKKENKEEFTQEPMKFEENIIELDINKLSK
DMVYEIYDLANTRHNPKDTNNKKLVLKVLDMGSCLLYHTNFVLSQEAMDVIAQKCKG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatttacacatttgcatttacatacagaatactctttacttgatggagcaaat
aaactcaaagagcttgctaaaactctaaaagcgcaaggtgcaacaagtgttgctatgact
gatcatggaaatatgtttggggctattgatttttataaaacgatgagggctgaggggatt
aaacctatcatagggcttgaagcgtatttgcataatcatgatgatttaagcgataaaagc
tcaagacaacgctttcatatttgtttatttgctaaaaatgaaattggctataaaaatttg
atgtatttaagctcgcaaagctatatacatggtttgtattattacccaaggattaataaa
aagctattagaagcacatagtgagggtttgatttgttcttctgcatgtttgcaaggtgag
gttaattggcatttaaataccaaaaatgaaagaaatttaaaatttggcgcaaaaggttat
gaaggtgcaaaagaagctgcgctttggtataaaaaggtttttggagatgatttttacctt
gagattatgcgtcatggtattgatgatcaaaaatttatcgatgattctatcatcaaactt
gctaaagagcttgatataaaaatcatcgcaacgaatgatacacattatacttttaaagaa
agagcagctgcacatgaagtatttatgtgcatagctatgggggttaagcttgatgatcca
gggcgtttaagacatgaagtacatgagttttatgtaaaaacaccagagcaaatgagtgaa
ctttttgctgatattcctgaagccattgaaaatactcaagaaatagctaataaatgtaat
ttagaattaaagctaggcgatccaacaccaccaaattttaaatttacccgtgaatatgca
aaaaaatatggcttaagtttaagtcaagaagatcaagaatttagctttgataatgatgat
atagtttttgagtatctttgtaaaaagggcttagaagaaagacttcaatttatcgacgag
agtaaacaccaagagtataaagatagacttgatttagaaattagtattattaaaaatatg
aaattttcaggttatatgcttatcgttcatgattttatcgctgcagctaaggaaaaagat
ataccagttggcccagggcgtgggagtgcagcggggagtttggtttcgtattgtttaaaa
attacagatttagatcctataccttataatcttctttttgagagatttttaaatcctgag
cgtgtatcaatgcccgatattgacgtggatttttgtcaagatagaagaggggaagtgatt
gattatgttattgataaatacggagctgaaaaggttgcacaagtcattacctttggtaag
cttttagcaaagggagtaatccgtgatgtagctagggtttgtgatatgagcatacctgat
gcggatgctttggcaaaattagttcctgaagagctaaaaatcactttagaaaaagcctat
gagcaagaaccaaaaatcgctgaatttgtaaattctcatccaaaaggacgtcaagtttgg
gattttgctaaggcactagagggtttaaatagaaatgcaggtatgcacgcagcaggggtt
gtgatatctaatgaagctttgtggaataaagctccactttttagacaaagcaaaaatgat
gagcgtcatttagttacgcagtattctaaagaatatcttgaagatgtagatttaatcaaa
tttgactttttgggtttaaaaactcttacagtaattgataatgcgattaagctagtgaaa
aagcgatatggtaaagatgtaatttgggaaaagattgatatgaatgatcctaaggtttat
aaaaccatacaaagtggtaataccttgggcattttccaaatagaatcaggcggtatgcaa
agtttgaatgctaggttaaagcctgaaagatttgaagatttaatcgcggttttagcttta
tatagaccaggcccacttgatagtgggatggtagatgattttatcgatatcaagcatggt
agaaaggctgcaacttatgcatttgaagatttaaaacctatacttgaaaacacttatggg
gttatagtttatcaagaacaagttatgcaaatagtgcaaaaaatcggtggtttttctttg
ggcggggctgataatgtgcgccgtgctatgggtaagaaaaaaagagaaattttggataat
cttaaagcagagtatttagaaggtgctaaaaaacaaggctatgatgagaaaaaggctgat
gatttgtttgagcttattttgaaatttgctgaatatggttttaacaaatctcactcagct
gcttacgcacttataacctttcaaacagcgtatttaaaaacttattatccaagtgagttt
atggctgcgcttttaacaagtgaagaaagtaatgtagataaggtcgcaaaatatatcgaa
gagatgaaaagaatgaacatcaagcttttgccaccaagtattaacaaagcccaaagagaa
tttagtgcaactaagcttgatgatggttctgaagctattatttatgggcttggagcgatt
aaaagtgtgggaattcctgcgatagaaaatatcatggcaattcgtaaagaagagggcttt
agtgattttgatgattttataagttcgattgatccaactaagattaataaaaaaaccata
gaaaatttagctaaatcaggtgcttttgatgagtttggctatactagaaaatgcttggtg
gataatcttgagcttatttcagaaacaagtaggaaaattgctgaagttaaaagaaactct
actgcttcactttttggagaagaggaaatagctgcagatatcaaagtagggcttcatgat
agtaaaatcgaatttgaactaatggaaaaactaggctatgaaaaggaaatcttaggaatt
tatgtatcaggccaccctttagataaatttgcaagtcaaatagaaggcatagagtatttt
aaaagtatggattttgaaacactcaaaggcgaaggcgagcttttggttgtaggaaagatt
gaagattttaaatcgatgatgagtaaaagtggtaaaaggtatgctaaggctgtggtttta
gacttttattctacttttgatatgatcatctttgaagcccaagtagaaaaagttgaagca
ctttttaaagaaagcaaagatgaaacctttgcctttttactaagatataaaaacaacgac
aatgacttaagctttagtttaaatgaaatttacaccctagaagaagcaaaggaaaatgag
ctaaaatcttttagtaagaaaaaaagctttgcaaaaaaagaaaacaaagaagaatttacc
caagagcctatgaaatttgaagaaaatatcatagaacttgatattaacaagcttagtaaa
gatatggtgtatgaaatttatgatctagctaatacaaggcacaatccaaaagatactaat
aacaaaaagcttgtgctaaaagtgcttgatatgggtagttgcttgctttatcatacaaat
tttgttctctcgcaagaagctatggatgtgatagctcaaaaatgtaaaggttaa
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