Campylobacter lari CCUG 22395: UPTC4110_0905
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Entry
UPTC4110_0905 CDS
T03551
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
clq
Campylobacter lari CCUG 22395
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clq03016
]
UPTC4110_0905 (ybbB)
Enzymes [BR:
clq01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
UPTC4110_0905 (ybbB)
Transfer RNA biogenesis [BR:
clq03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
UPTC4110_0905 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
DSPc
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AJD03450
LinkDB
All DBs
Position
875201..876184
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AA seq
327 aa
AA seq
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MYKEVDFENFLKFNFDLLIDARSPKEYKLAHIKSAQNYYALNDNEFEEIGTLYKKNKGLA
KAKGASYICKNMSEHINKIYQNYKIGSLVGIYCARGGKRSKAIALILAELGYRVVRLEGG
YKAYRSYVSEFFRKDLNIEFLCLCGNTASGKSDLIQTLDNALNLEKLANHQGSSFGKIYG
EQPSQKAFEDELFYFLKDYTYKTCFIEAESRQIGNLTIPLNLYNSMQKAKKIWCECDTNL
RIQRVLKNYTPMDKKVFYQSVEKISPYISKDFKLRLCQNYEENNLELCVKMLFKYYDKVY
KKPSKIDYFINSSNLDEAKKHLMSLNS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagaagttgattttgaaaattttttaaaatttaattttgatcttttaattgat
gcaagaagccccaaagaatacaaacttgctcatataaaatctgcacaaaattactacgca
ctcaatgataatgaatttgaagaaataggcacactttataagaaaaataaaggcttagct
aaagcaaaaggcgcaagttatatttgtaaaaatatgagcgagcatattaataaaatttat
caaaattataaaataggctctttggtgggaatttattgcgcaagaggtggtaaaagatca
aaagccattgctttaatcttagctgaacttggttatagagttgtaagattagaaggtgga
tataaagcttatagaagttatgtgagtgagttttttagaaaagatttaaatattgagttt
ttatgtctttgtggtaatacagcaagtggtaaaagtgatttaatccaaactttagataat
gctttaaatttagaaaaactagccaaccaccaaggatcaagttttggtaaaatttatgga
gaacaaccaagccaaaaagcttttgaagatgaattgttttattttttaaaagattatact
tataaaacttgttttatagaagctgaaagcagacaaattggaaatttaactatcccgcta
aatttatacaatagcatgcaaaaagctaagaaaatttggtgtgaatgcgacacaaattta
cgcattcaaagagttttaaaaaactatactccaatggataaaaaagtattttatcaaagt
gttgaaaaaatatcaccttatatcagcaaggattttaaattaagactttgtcaaaattat
gaagaaaataatttagaactttgtgtaaaaatgctttttaaatactatgataaagtatat
aaaaaaccttcaaaaattgattattttatcaatagttctaatttagatgaagctaaaaaa
catcttatgagtttaaactcataa
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