Campylobacter lari CCUG 22395: UPTC4110_0945
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Entry
UPTC4110_0945 CDS
T03551
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
clq
Campylobacter lari CCUG 22395
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clq03016
]
UPTC4110_0945 (trmA)
Enzymes [BR:
clq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
UPTC4110_0945 (trmA)
Transfer RNA biogenesis [BR:
clq03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
UPTC4110_0945 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_4
MTS
Methyltransf_12
Methyltransf_11
Cons_hypoth95
DREV
TRM
Methyltransf_23
MethyltransfD12
Motif
Other DBs
NCBI-ProteinID:
AJD03490
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All DBs
Position
complement(910454..911494)
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AA seq
346 aa
AA seq
DB search
MHFEEKIALNKALFSSLYDKEIQCFKSPLKAYRTRAEFSIYHHENGEISYAMFENKKKIP
IEKFDIADEKIQKHMPILLNNLNENLKHKLFGVEFLATKLDLSVTLLFHKNIELIAQDLQ
QLAEKLNLKLIARSRGKKLVFNGENLRQALKINTNEFLYEFNNDCFIQPNTFINEKMIEW
VISCIGSDFKQDLLELYCGYGNFTIALARNFNKVLATEISKKNIEFALKNCVLNSIENIV
FTRLSSEELSQALKKEREFNRLKGIDLDSFKISHVLVDPPRAGLDLSVIELIKNYENIIY
ISCNPITLKENLEILCQSHEILNLAFFDQFANTPHLECGVHLRKKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgaagaaaaaattgctttaaataaagcattgttttcttctttatatgataaa
gaaattcagtgctttaaatcacctttaaaagcttatagaactagggcagaattttctata
tatcatcatgaaaatggggaaatttcttatgcaatgtttgaaaataagaaaaaaattcct
attgaaaaatttgatatagcagatgaaaaaattcaaaaacatatgcctattttattaaat
aatctaaatgaaaatttaaaacataaactttttggagtagagtttttagctacaaaatta
gatttaagtgtaactttacttttccataaaaatatagagctaattgcacaagatttgcaa
caattagcagaaaaattaaatctcaaactcatagcaagaagcaggggtaaaaaactcgta
tttaatggggagaatttaagacaagctttaaaaatcaatacaaatgaatttttatatgag
tttaataatgattgttttatccagcctaatacttttatcaatgaaaagatgattgaatgg
gttatatcttgtattggaagtgattttaaacaagatttattagagctttattgtggttat
ggaaattttaccatagctttagcaagaaattttaacaaagttttagcaactgaaatttct
aaaaaaaatatagaatttgctttaaaaaattgtgttttaaattctattgaaaatatagtt
tttacaaggctttctagtgaagagttaagtcaagctttgaaaaaagaaagagaatttaac
cgcttaaaaggtatagatttagatagctttaaaatatctcatgtcttggttgatcctcca
agagcaggacttgatctaagcgtgattgaacttattaaaaattatgaaaatatcatttat
atttcgtgtaatcctatcactttaaaagaaaatcttgaaattttatgtcaaagtcatgaa
attttaaatttggccttttttgatcaatttgccaatactcctcatcttgaatgtggggta
catttaagaaaaaaagcttag
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