Campylobacter lari CCUG 22395: UPTC4110_1005
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Entry
UPTC4110_1005 CDS
T03551
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03030
DNA replication
clq03430
Mismatch repair
clq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UPTC4110_1005 (dnaQ)
03430 Mismatch repair
UPTC4110_1005 (dnaQ)
03440 Homologous recombination
UPTC4110_1005 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clq03032
]
UPTC4110_1005 (dnaQ)
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_1005 (dnaQ)
Enzymes [BR:
clq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UPTC4110_1005 (dnaQ)
DNA replication proteins [BR:
clq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UPTC4110_1005 (dnaQ)
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UPTC4110_1005 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
HTH_52
Motif
Other DBs
NCBI-ProteinID:
AJD03548
LinkDB
All DBs
Position
complement(969037..969801)
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AA seq
254 aa
AA seq
DB search
MSQQQIDDLIIKLSKENKPFPWVLKELAKIEELNHYDFDLYIFELLGLGVELNAQNCLCL
KSKNTKIKDEIFCVVDIESTGGIKSGQILEIGAVKIQNCKEIDRFESFIKVESIPENITE
LTGISLDMVENAPSLKTVLNDFKLFLKDSIFVAHNVRFDYHFISKAMYENDFGVLLNRRL
CTIDLAKKCIESPKYGLDALKEFLCIESKHHRALSDALAASEILKYCLKKIPFYIKTTEE
LLHFSKQAKNQSKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaacaacaaatcgatgatttaatcatcaagctaagtaaagaaaacaaacctttt
ccttgggttttaaaagagcttgcaaaaatagaagaactaaatcattatgattttgattta
tatatttttgagcttttaggactaggagtcgagcttaatgcacaaaattgtttgtgtttg
aaaagcaaaaatacaaaaataaaagatgagattttttgtgttgtagatattgaaagcacc
ggtgggataaaaagtggtcaaattttagaaataggtgcagtgaaaattcaaaactgtaaa
gaaattgatagattcgagagttttataaaagtagaaagcatacctgaaaatattacagaa
ttaacagggattagtttggatatggtagaaaatgcaccttctttaaaaactgtgttaaat
gattttaaattgtttttaaaagatagcatttttgtagcacataatgtgcgttttgattat
cattttatatctaaagctatgtatgaaaatgattttggagtgcttttaaatagaagatta
tgtacaattgatttagctaaaaaatgcattgaaagtcccaagtacggccttgatgctcta
aaagagtttttgtgtattgaaagtaagcatcatagagccttaagtgatgctttggctgca
agtgaaattttaaaatactgtcttaaaaaaattcctttttatataaaaactaccgaagaa
ttgttacattttagcaagcaagctaaaaatcaatctaaaaaataa
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