Campylobacter lari CCUG 22395: UPTC4110_1034
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Entry
UPTC4110_1034 CDS
T03551
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03420
Nucleotide excision repair
clq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UPTC4110_1034
03430 Mismatch repair
UPTC4110_1034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_1034
Enzymes [BR:
clq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UPTC4110_1034
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UPTC4110_1034
MMR (mismatch excision repair)
Other MMR factors
UPTC4110_1034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
PcrA_UvrD_tudor
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AJD03577
LinkDB
All DBs
Position
999673..1001736
Genome browser
AA seq
687 aa
AA seq
DB search
MSFFEGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITTRLAYLIDHVGIPAQNTLTLTFT
NKAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKI
LKDLASENLQSSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQYEH
FLIQNNFMDFDDLLMLTNKILEDEQFAKEQSQKYTYITVDEYQDTNTLQYQILKKLCTSH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSIHKIKEKDDLLAMILA
LEEEFKIKEFYKDNPEGEDKLLNIDELYANLKDKITHGSYNGLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTRLEKSRFFGESNVIKKELTLDHQKNCYKKGDLIKHKIFGIGRVTGVSK
IGAEEKLTINFGGIERMIMSSFVEKVI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttttgaaggtttaaatgatagccaaaaagaagctatcatgcatattgatgga
gctatgttaatactagcaggcgcaggtagtggaaagactaaaaccattaccactaggctt
gcttatttaatcgatcatgtaggtattcctgcgcaaaacaccctcacactaacctttaca
aataaagctgctaatgtaatgaaaacaagagccttagcacttttacaagatcaaaatcta
cacaatccccttttatgcacttttcataaatttggcttgttattcttaagactttatagc
gaaagaattaatagagcaaataattttgtcattatcgatacagatgataaaaagaaaata
ctcaaagatttagctagcgaaaatttacaaagctctttagcaagcataggtgcttatatt
tcaaattttaaaaatcaaagcaaaagtgctcaagaaatacgcaaagaattagaattttta
aaagatgaaaaaaacaaaaattacgaagaaatcattcatttatatgagcaatatgaacat
tttttaatccaaaataattttatggattttgatgatttactcatgctaactaataaaatt
ttagaagatgaacaatttgcaaaagagcaaagtcaaaaatatacctatataacagtagat
gagtatcaagataccaataccttacaatatcaaattctaaaaaaactttgcacgtctcat
gaaaatatttgcgtggtgggtgatgatgatcaaagtatttatggatggcgtggggctaaa
atagaaaatatcttaaatttcaaagagcaatttaacaatgtaaaattagtcaaactagag
caaaattaccgctcaactagcgctattttacaagctgcaaatgaacttatagagcataat
agaaaaagactagggaaaactttaatttgcaccaaagatgagggagaagaaatcacaatt
ttgcaaaatgatgatgaaaaaattgaaagctttaaggttgcaagagaagtttcaaaactt
ttaaactcagggattaatcctagtgaaatagccatactttatagagtaaatgccctatct
cgtgctcttgaagaagcttttagcaaagaaaaaattccttttaaattgctaagtggaatt
cgtttttatgaaagagctgagattaaagatatcatttcctatttaagattactttcaaat
ttaaatgatgattattcttttaaacgcattatcaaccgccctaaaagaaactttggtaat
gcaagtttagaaaagctagaaaattatgctaaagaaaatcatttgtctttatttgaaagt
ctatgtgctttgcaaggaagtggtttttttagtaaaaaaacagacaaagaattagaaaaa
ttcatactaagcatacacaaaatcaaagaaaaagatgatttgcttgcaatgattttagcc
ttagaagaagaatttaaaatcaaagaattttacaaagataatccagagggtgaagataaa
cttttaaatatagatgaactttatgctaatttaaaagataaaattactcatggaagttat
aatggcttagatgatattttaaatgaaatttctttacttaatgagcaagatggacttgat
aaagaaagtatttgtattatgagtattcatgcaagtaaaggacttgagtttgattatgtt
tttatcataggtttagaagaaggatttttcccgctcactagcgaatcaagcaatatagaa
gaagaaagaagacttgcttatgtagcaatcactagagccaagaaaaaactttatttaagt
tatgctaattctagattttataagggaagtcgcacaagattagaaaaaagtagatttttt
ggtgagagtaatgtaatcaaaaaagaattaacactagatcatcaaaaaaattgctacaaa
aaaggcgatttaatcaaacataaaatttttggcataggcagagtcactggggtaagtaaa
ataggtgctgaagaaaaactcacgattaattttggaggcatagaaagaatgataatgtca
agttttgtggaaaaagtgatatga
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