Campylobacter lari CCUG 22395: UPTC4110_1261
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Entry
UPTC4110_1261 CDS
T03551
Symbol
ruvB
Name
(GenBank) RuvABC resolvasome, subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UPTC4110_1261 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_1261 (ruvB)
Enzymes [BR:
clq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UPTC4110_1261 (ruvB)
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UPTC4110_1261 (ruvB)
RecFOR pathway proteins
UPTC4110_1261 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
Sigma54_activat
AAA_14
nSTAND3
AAA_2
RNA_helicase
Sigma54_activ_2
Rad17
NB-ARC
AAA_PrkA
ABC_tran
NACHT
Bac_DnaA
HAMP_2
AAA_18
RsgA_GTPase
TsaE
DUF3738
Motif
Other DBs
NCBI-ProteinID:
AJD03800
LinkDB
All DBs
Position
1230691..1231701
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AA seq
336 aa
AA seq
DB search
MDRIVEIEKFSPDETYETSLRPSNFDGYIGQENIKKNLEIFIKAAKKRNECLDHILFSGP
AGLGKTTLANIISYEMNANIKTTAAPMIEKSGDLAAILTNLSEGDILFIDEIHRLSPAIE
EVLYPAMEDFRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMQFRLEF
YKNEELAIILEKAALKLNKTCEKKASLEIAKRSRSTPRIALRLLKRVRDFSDVNDEEIIS
EKRAKEALDSLGVNELGFDAMDLRYLELLTEAKRKPIGLSSIAAALSEDENTIEDVIEPY
LLANGYIERTAKGRIASLKSFDVLKLKYNKGLFDEK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatcgtagagattgaaaaattctcccctgatgaaacttatgaaacaagcctt
agaccctcaaattttgacggctacataggacaagaaaatattaaaaaaaatttagaaatt
ttcatcaaagctgctaaaaaaagaaatgaatgtctagatcatatcctttttagtgggcct
gcaggacttggtaaaacaactttagcaaacattatctcatatgaaatgaatgcaaatatc
aaaaccaccgctgcgcccatgatagaaaaaagcggagatttagctgcgattttaactaac
cttagcgaaggagatattttatttatcgatgaaattcatcgcttaagtcctgccatagaa
gaagtgctttaccctgctatggaggattttcgtcttgatatcatcatcggtagtggccct
gctgcacaaacaatcaaaatcgatttgcccaaatttactttaataggcgctactacaaga
gcaggtatgctaagcaatcctttacgcgatcgctttggtatgcaatttcgcttggaattt
tataaaaatgaagaacttgctatcattttagaaaaagcagctctaaagcttaataaaact
tgcgaaaaaaaggcttctttagaaatagccaaacgcagtcgctcaaccccaagaattgct
ttaagattgcttaagcgtgtaagagacttttctgatgtaaatgatgaagaaatcattagc
gaaaaaagagctaaagaagcgcttgattctttaggggtaaatgagcttggttttgacgcg
atggatttgcggtatttagagcttttaactgaagctaaaagaaaacctataggactttct
agtatagctgcagcattgagcgaggatgaaaataccatagaggatgtgatagagccatat
ttactagcaaatggttatatagaaagaacagccaaaggtcgtattgcgagcttaaaaagc
tttgatgttttaaaattaaaatacaacaagggtttatttgatgaaaagtag
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