Campylobacter lari RM16701: UPTC16701_0401
Help
Entry
UPTC16701_0401 CDS
T03550
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
clr
Campylobacter lari RM16701
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clr03016
]
UPTC16701_0401 (truD)
Enzymes [BR:
clr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
UPTC16701_0401 (truD)
Transfer RNA biogenesis [BR:
clr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UPTC16701_0401 (truD)
Prokaryotic type
UPTC16701_0401 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
WYL_2
DUF2732
Motif
Other DBs
NCBI-ProteinID:
AJD04468
LinkDB
All DBs
Position
369949..371073
Genome browser
AA seq
374 aa
AA seq
DB search
MEENIIFKPLYTLKHSPINVYFSKNSNDFVVREKPLYEFSGKGEHLILHIQKKDLSTSEA
LRILSEQSGVKMKDFGYSGLKDKQGLTFQYISMPKKFEESLRNFKHDKMKILETFYHDNK
LRIGHLKGNSFFIRLKKVSKVDALKIEQAFKNIQKQGFANYFGYQRFGKFQDNFSQGLEI
LKGKKIKNKKMQEFLISAFQSELFNRYLSKRVELSHFINDFSEKEIKQIYGLEKEEIKSL
KNQTQFFKLLKDEVLGHYPFGKCFICEDLSSEVERFNQKDISAMGLLIGSKAYEANEGLA
KKLEDEIFSFAYEFKDKMQGSRRFMWSYLQDCKSHYDEEKAHFTLEFFLQKGSYATVVLE
EILHTDIFEQTHNI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaacatcatttttaagcccttatatactttaaaacatagcccgataaatgtg
tatttttcaaaaaatagcaatgattttgtagtaagagaaaagcctttatatgaatttagt
ggcaaaggtgaacatttaattttgcatatacaaaaaaaagatctaagcactagcgaggct
ttgagaattttaagcgagcaaagcggtgttaaaatgaaagattttggctatagcggttta
aaagataaacaaggtttaacttttcaatatatttctatgcctaaaaaatttgaagagagc
ttaagaaattttaaacatgataagatgaaaattttagaaactttttatcatgataataaa
cttagaatagggcatttaaaaggaaattcattttttataagattaaaaaaagtttcaaaa
gtggatgctttaaaaattgaacaagcttttaaaaatatccaaaaacaaggttttgctaat
tattttggatatcaacgttttggcaaatttcaagataatttttcacaaggactagaaatt
ttaaaaggcaaaaaaatcaaaaataaaaaaatgcaagaatttttaatttctgcttttcaa
agcgagctttttaatagatatttgagcaaaagggtggaattgtcacattttattaatgac
tttagtgaaaaagaaataaaacaaatttatggtttagaaaaagaagaaatcaaaagttta
aaaaatcaaacacagttttttaagcttttaaaggacgaagttttaggacattatcctttt
ggtaaatgttttatatgtgaagatttatcaagtgaagtagaaagatttaatcaaaaagat
attagcgcaatgggtcttttaataggctctaaagcttatgaagcaaatgaaggtctagct
aaaaaattagaagatgagattttttcttttgcatatgagtttaaagataaaatgcaaggt
tcaaggcgttttatgtggtcttatttacaagattgtaaaagtcattatgatgaagaaaaa
gctcattttactttggagtttttcttgcaaaaaggctcgtatgccacggtggttttggag
gaaattttacacacagacatctttgaacaaacacataatatataa
DBGET
integrated database retrieval system
