Campylobacter lari RM16701: UPTC16701_0487
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Entry
UPTC16701_0487 CDS
T03550
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr00260
Glycine, serine and threonine metabolism
clr00460
Cyanoamino acid metabolism
clr00630
Glyoxylate and dicarboxylate metabolism
clr00670
One carbon pool by folate
clr00680
Methane metabolism
clr01100
Metabolic pathways
clr01110
Biosynthesis of secondary metabolites
clr01120
Microbial metabolism in diverse environments
clr01200
Carbon metabolism
clr01230
Biosynthesis of amino acids
clr01240
Biosynthesis of cofactors
clr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UPTC16701_0487 (glyA)
09102 Energy metabolism
00680 Methane metabolism
UPTC16701_0487 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UPTC16701_0487 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
UPTC16701_0487 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UPTC16701_0487 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UPTC16701_0487 (glyA)
Enzymes [BR:
clr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
UPTC16701_0487 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AJD04544
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Position
459263..460504
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AA seq
413 aa
AA seq
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MLENFDKEIFDLTQKELARQCDGLEMIASENFTIPEVMEVMGSILTNKYAEGYPGKRYYG
GCEFVDEIETIAIERCKKLFNCNFANVQPSSGSQANQGVYMALLNPGDRILGMDLSHGGH
LTHGSKVSSSGKVYESFFYGVELDGRINYDKVREIAKEVKPKLIVCGASAYPRVIDFAKF
REIADEVGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMCNDEEI
AKKINSAIFPGIQGGPLMHVIAAKAVGFKYNLSDEWKIYAKQIIKNTATLAQVLIDRKYD
LVSGGTDNHLILLSFLNKEFSGKDADLALERAGITANKNTVPGETRSPFVTSGLRLGTAA
LTARGFKEEQIAIVANYIADILDDIQNTKLQEEIKVKLKDLASNFIIYERALF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaattttgataaagaaatttttgatttaacccaaaaagagttagcaagacaa
tgcgatggtcttgaaatgatagcaagtgaaaattttaccataccagaagttatggaggta
atgggtagcattttaacaaataaatatgcagaaggctatcctggtaaaagatattatggt
ggatgtgaatttgtagatgagattgaaacgattgctatagaaagatgtaaaaaacttttt
aattgtaattttgccaatgtacaacctagttcaggttcgcaagcaaatcaaggtgtgtat
atggcattattaaatcctggtgatagaattttgggtatggatttaagtcatggaggacac
ttaactcatggttctaaagtaagttcttctggaaaagtttatgaaagctttttttatgga
gttgagcttgatggaagaattaattatgataaagttagagagatagcaaaagaagttaag
ccaaaacttattgtttgtggtgctagtgcttatcctagagtgattgattttgctaaattt
agagaaatagcagatgaggttggtgcatacttgtttgctgatattgcacatattgcaggt
ttggttgtagcaggtgagcatcctagtccattcccttatgctcatgttgtaagttctact
acacataaaactttaagaggtccaagaggtgggattattatgtgtaatgatgaagaaatt
gctaaaaaaatcaattctgcaattttcccaggtattcaaggtggtccactaatgcatgta
attgctgctaaggcagttgggtttaaatataatttaagtgatgagtggaaaatttatgct
aaacaaatcattaaaaatactgctactttggcacaagttttaatagatagaaaatatgat
ttagtcagtggcggtactgataatcatttgattttattaagttttttaaataaagaattt
agcggtaaagatgcagatttagcactagaaagagcaggtattacagctaataaaaatact
gttccaggtgaaactagaagtccttttgtaacgagtggtttaagacttggaacagcggct
ttaacagcaagaggctttaaggaagagcaaattgctattgttgcaaattatatagctgat
attttagatgatatacaaaatactaaattacaagaggaaatcaaggttaaactaaaggat
ttagcaagtaattttattatttacgaaagggctttattttga
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