Campylobacter lari RM16701: UPTC16701_0519
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Entry
UPTC16701_0519 CDS
T03550
Name
(GenBank) putative helicase, PIF1 family (DUF889 domain)
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clr
Campylobacter lari RM16701
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clr03032
]
UPTC16701_0519
03029 Mitochondrial biogenesis [BR:
clr03029
]
UPTC16701_0519
Enzymes [BR:
clr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
UPTC16701_0519
DNA replication proteins [BR:
clr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
UPTC16701_0519
Mitochondrial biogenesis [BR:
clr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
UPTC16701_0519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Viral_helicase1
AAA_22
SH3_13
UvrD_C_2
AAA_24
nSTAND3
AAA_11
AAA_5
AAA_16
AAA_14
IstB_IS21
NTPase_1
TrwB_AAD_bind
RsgA_GTPase
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AJD04566
LinkDB
All DBs
Position
490373..491716
Genome browser
AA seq
447 aa
AA seq
DB search
MNLVVDKLRFFLKNNNVFLSGGAGVGKSFLTMELIRSYRVQGKIVIVLGSTALSAFNIGG
VTLHSFFAFKRCQNYDELYYEDRKQKDKLEKLKRILKQCDLLVIDEISMVSASLMEMIYY
RLSRSGFNGKILLVGDFFQLPPVVKHKENQNQNTLFQNTLYAFSSQAWNDLKFINLKLSV
TKRTLDKQFYEYLFFLRMGEVNKEMLNFFKKMLISSKNLLEYMDEYTLLCATNKKTNYIN
TEKLNLLQGKESIFKAKAEKLDCTLDDKTYEQWINGLNSLGELKLKIGAKIIFCVNNKEE
NYYNGEQGVVLDFIKDKEQECILIEKNNGERLKLKPYEYTLEEYELDKDEKLEVKIKAKF
VQFPIKLAYAITIHKSQGMSIDKLICDIDGIFEKGQLYVCLSRAINPSNLKIVYNYKMPF
EDYFLKILKFDKEVKQFYLQEKFVNLE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttagttgtagataaattaagattttttttaaaaaataataatgtatttttaagt
ggtggtgcaggtgttggtaagtcttttttaactatggagcttataagatcttatagagtt
caaggaaaaattgttattgtattgggttctaccgctcttagtgcttttaatataggtggg
gttactttacatagtttttttgcttttaaaagatgtcaaaattatgatgagttatattat
gaagatagaaagcaaaaagataaactagaaaaattaaagagaattttaaaacaatgtgat
ttattggttattgatgaaatctctatggtaagtgcttcgttgatggaaatgatttattat
agattatcaagaagtggttttaatggtaaaattttattagttggagatttttttcaactt
ccacccgtggttaagcataaagaaaatcaaaaccaaaatactttatttcaaaatacttta
tatgctttttcttcgcaagcttggaatgatcttaaatttattaatctaaaacttagcgtt
acaaaaagaactttagataagcaattttatgaatatttgttttttcttagaatgggtgaa
gtaaataaagaaatgctaaatttctttaaaaaaatgttaattagttcaaaaaatttactt
gaatatatggatgaatatactctattatgtgccacaaataaaaaaactaattatattaat
actgaaaaattaaatcttttacaaggtaaagaaagtatatttaaagcaaaagctgaaaaa
ctagattgtaccttagatgataaaacttatgagcagtggattaatggacttaattctttg
ggtgaattaaaattaaaaataggcgctaagattattttttgtgtgaataataaagaagag
aattattataatggggagcaaggtgttgttttagattttataaaagataaagagcaagaa
tgtattttaatagaaaaaaataatggtgaaagattgaaattaaaaccatatgaatatacc
ttagaagagtatgagttagacaaagatgaaaaactagaagttaagataaaagctaaattt
gttcaatttcctataaaactagcttatgctataacaatccataaatctcaaggtatgagt
atagataaattaatatgtgatattgatggaatttttgaaaaaggacaattgtatgtatgt
ttatcaagagctattaatccaagtaatttaaaaatcgtatataattataaaatgcctttt
gaggattattttttaaaaattttaaaattcgataaagaggtaaaacaattttatttacaa
gaaaagtttgtaaatttagaataa
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