Campylobacter lari RM16701: UPTC16701_0552
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Entry
UPTC16701_0552 CDS
T03550
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UPTC16701_0552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clr03400
]
UPTC16701_0552
Enzymes [BR:
clr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UPTC16701_0552
DNA repair and recombination proteins [BR:
clr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UPTC16701_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJD04598
LinkDB
All DBs
Position
523524..524135
Genome browser
AA seq
203 aa
AA seq
DB search
MNKRSLYYLKAFGYEYFNEQKQIRCFNLSFKELNERVKTCNLCHFSKLRKHSLMEKEAKN
AKILIYQAFIDKEENESGKFFASKNKQEFLMLCKELLNLKEDEIYFSYMFKCFSNFKMDE
QALKLCLPYFYNELDFVKAKVILCLGQEAFASLGFENFQKYKGQCMRFNNALLLPSYDLN
FVSKNPSFYAEFIDDIKKIKGYL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgcagtttgtattatctaaaagcttttggttatgaatactttaatgagcaa
aagcaaattaggtgttttaacttaagctttaaagaattaaacgaaagagtgaaaacttgc
aatctttgtcatttttccaaattaagaaagcatagtttaatggaaaaagaagccaaaaat
gctaaaattttgatttatcaagcctttatcgataaagaagaaaatgaaagtggaaagttt
tttgcttctaaaaataagcaagagtttttaatgctttgtaaagagcttttaaatttaaaa
gaagatgaaatatatttttcttatatgtttaaatgttttagtaattttaaaatggatgaa
caagcattaaaattatgcttaccatatttttataacgagcttgattttgtaaaagcaaag
gttattttatgtcttggtcaagaagcttttgcaagtttgggttttgagaactttcaaaaa
tacaaagggcaatgtatgcgttttaataatgctttgcttttgccaagttatgatttgaat
tttgtgagtaaaaatcctagcttttatgctgaatttatagatgatattaaaaaaataaaa
ggttatttatga
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