Campylobacter lari RM16701: UPTC16701_0647
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Entry
UPTC16701_0647 CDS
T03550
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UPTC16701_0647 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clr01007
]
UPTC16701_0647 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clr03016
]
UPTC16701_0647 (valS)
Enzymes [BR:
clr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
UPTC16701_0647 (valS)
Amino acid related enzymes [BR:
clr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
UPTC16701_0647 (valS)
Transfer RNA biogenesis [BR:
clr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
UPTC16701_0647 (valS)
Prokaryotic type
UPTC16701_0647 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
DUF1664
tRNA-synt_1f
Perilipin
EXS
THOC7
DUF7615
KIF21A
Motif
Other DBs
NCBI-ProteinID:
AJD04687
LinkDB
All DBs
Position
complement(619317..621929)
Genome browser
AA seq
870 aa
AA seq
DB search
MYDKSLEKEYYKICEERGYFEINGNEKIQEKGKNFCIMMPPPNVTGVLHIGHALTCTLQD
ITTRYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLAQGVKKEDLGREEFIKKVWEWKEQS
GGTIVKQMRILGITPAWSRLRFTMDEGLVNAVKKAFVDLYDKKLIVRGNYMVNWCTHDGA
LSDIEVEHKENKGKLYYLKYFLENSQEYIVVATTRPETYFGDSAVMVNPNDERFKHLIGK
NVILPLIDRKIPIIADEHVDMEFGTGFVKVTPAHDHNDYEVGLRHKLEFITIFDEKGILN
EHCLHFKGLERLEARDVIIKELQEKGFVEKIEDYTNQVGYCYRCKNVVEPYISKQWFVKN
EIAKESIEKVNLGGSKFYPAHWINSFNAWMRDLKDWCISRQLWWGHQIPVYYCECSHEWA
SEETPSQCPKCQSTNFKQDPDVLDTWFSSGLWAMSTLGWGNKDWGKNTLWHEDDLKDFYP
NSLLITGFDILFFWVARMMFQSTNALGELPFKDIYLHALVKDEQGRKMSKSLGNVIDPVQ
SVDEYSADILRFTLALLAIQGRDIKLSNDKLIQVRNFTNKLYNASKFLLLNEEKFEDLDK
SKIQTNLAKYILSRFEVCIKETRENLDNYRFNDAANTLYRFFWDEFCDWGIELSKAEKSS
IKELGSIFKEALKLLNPFMPFISEYLYHELSKTSIQTHESIMISKYPKFNSRDEKIEKLF
NIIIESIVSLRRAKTLVELANAKIQKACIKLNDEGLIAELKNYTNFISTLAKCENIEFIN
TNLEKSIRDVSENLEVFIPTQDLDLSGVLNRLNSQKTKLEKEFNKLDAMMKNEKFISNAP
AAVVEQNKTQLENIKAQLEKINDEISNLEG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtatgataaatcactagaaaaagagtattataaaatttgcgaagaacgcggatatttt
gaaatcaatggcaatgaaaaaattcaagaaaaaggcaaaaacttttgtattatgatgcca
ccacccaatgtaacaggtgttttacacataggccatgctctaacttgtactttacaagat
atcacaacgcgttataaaagaatggatggctataaaaccctttatcaaccggggcttgat
catgcaggcattgcaacacaaaatgttgtagaaaaacaacttttagctcaaggtgttaaa
aaagaagatttaggcagagaagaatttataaaaaaagtatgggaatggaaagaacaaagc
ggtggcactatagttaagcaaatgcgaattttaggtatcactcctgcttggagtcgctta
cgttttactatggatgagggtttggttaatgcggttaaaaaagcctttgtagatctttat
gataaaaagcttattgtgcgtggaaattacatggtaaattggtgtactcatgatggagca
ttaagcgatatagaagtagaacataaagaaaataaaggaaaattatattatttaaaatat
ttcttagaaaattctcaagaatacatcgtagtagccaccacaagaccagaaacttatttt
ggcgatagtgctgtgatggttaatccaaatgatgaaagatttaaacacttaataggtaaa
aatgtcattttacctttaatagatagaaaaattcctattattgctgatgagcatgtagat
atggaatttggtacaggctttgtgaaagtaaccccagcacatgatcataatgactatgaa
gtaggcttaagacataaacttgaatttattactatctttgatgaaaaaggtattttaaat
gaacattgcttgcattttaaaggcttagaaagattagaagcaagagatgttattataaaa
gaattacaagaaaaaggttttgttgaaaaaatagaagactatactaatcaagtaggatat
tgctatcgttgtaaaaatgtggttgagccatatatttccaagcaatggtttgtaaaaaat
gaaatcgcaaaagaaagcatagaaaaagttaatcttggtggaagcaaattctaccctgcg
cattggattaatagttttaatgcttggatgagagatttaaaagattggtgtatttcaaga
caactttggtggggtcatcaaattcctgtgtattactgtgaatgctctcatgaatgggca
agcgaagaaactccaagccaatgcccaaaatgccaaagcactaatttcaaacaagaccct
gatgttttagacacttggttttcttctggtctttgggctatgagtactttaggttggggt
aataaagactggggcaaaaacacactttggcatgaagatgacttaaaagatttctatcca
aattctttattaatcaccggctttgatattttatttttctgggttgcaagaatgatgttt
caaagtactaatgccttaggtgagcttccttttaaagatatatatttgcatgctttggtt
aaagatgagcaaggtagaaaaatgagtaagtctttaggtaatgtcattgatcctgtgcaa
agtgtggatgaatacagtgctgatatcttgcgttttacccttgctcttttagctatccaa
ggtagagatataaaattaagcaatgacaaactcatacaagttagaaattttaccaacaag
ctttataatgcaagcaaatttttacttttaaatgaagaaaaatttgaagatttagataaa
agtaaaattcaaactaacttggcaaaatacatactgtctcgttttgaagtatgcataaaa
gaaacaagagaaaatttagataattaccgctttaatgatgcggcaaatactttgtataga
tttttttgggatgaattttgtgattgggggatcgagcttagtaaggctgaaaaatcaagc
ataaaagagcttggaagtatttttaaagaagcattaaaacttttaaatccttttatgcca
tttattagtgagtatttataccatgagttaagtaaaacttctatccaaactcatgaatct
ataatgatttcaaaatatcctaaatttaattctagagatgaaaaaatcgaaaaattattt
aatatcattatagaaagcatagtgagtttacgccgtgcaaaaaccttagtagaacttgca
aatgcaaaaattcaaaaagcttgtataaaattaaacgatgagggtttaatagctgagtta
aaaaattacactaattttatctcaacacttgcaaaatgtgaaaacatcgagtttatcaat
acaaatttagaaaaatccatcagagatgtaagtgagaatttagaagtatttataccaact
caagatcttgatttaagcggtgttttaaatagacttaatagtcaaaaaacaaaacttgaa
aaagaatttaacaagctagatgctatgatgaaaaatgaaaaatttatctctaatgcacct
gctgcggttgttgaacaaaataaaactcaacttgaaaacattaaagctcaacttgaaaaa
atcaatgatgaaatttctaatttagaaggctaa
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