Campylobacter lari RM16701: UPTC16701_0965
Help
Entry
UPTC16701_0965 CDS
T03550
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr02024
Quorum sensing
clr03060
Protein export
clr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
UPTC16701_0965 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
UPTC16701_0965 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UPTC16701_0965 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
clr02044
]
UPTC16701_0965 (ffh)
Enzymes [BR:
clr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
UPTC16701_0965 (ffh)
Secretion system [BR:
clr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
UPTC16701_0965 (ffh)
Eukaryotic Sec-SRP protein
UPTC16701_0965 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_31
AAA_22
6PF2K
Zeta_toxin
AAA_19
nSTAND3
AAA_30
YqeC
AAA
Fer4_NifH
AAA_24
Anamorsin_N
DUF6471
AAA_33
AAA_14
KTI12
Motif
Other DBs
NCBI-ProteinID:
AJD05000
LinkDB
All DBs
Position
complement(942630..943967)
Genome browser
AA seq
445 aa
AA seq
DB search
MFEIVSESFKSAVNKLRFVDDEKALKNALDTLKKALLKADVHHKVTKELLTLVENDVKTN
GIGQKQFLDSIKKNLEEILSVKGKNQGFVFASKPPTVVLMCGLQGGGKTTTTVKIANYLK
LRNKKVLIAACDLQRLAAVEQLRQLTQANELDLFFIENESNPLNVAKQALEKAKNSMYDV
LLVDTAGRLAIDTALMNELKEVKAILNPDEVFYVADAMSGQDGVKTASSFNEALEITGVI
LSKFDADTKGGVALGIAKQIGVPLRFIGVGEKVADLEVFIPDRIVNRIMGEGDLATLAEK
TAAIIDEKEAKKLNKKIKKGEFNFNDFLNQMESVKKLGSMKSIIGMIPGLSSMAANIKDI
DLDNSKEIIHIKAMISSMTPKERENPDLLNNARKRRIAEGAGLSQMEVNRFLKQFSNAAK
LAKKFSNKKGMENFMNMLQQAKRPQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaaatagttagtgagtcgtttaaatccgcagttaataaacttcgttttgttgat
gatgaaaaagctttaaaaaacgctcttgacactttaaaaaaagcccttttaaaagcagat
gtacatcataaagttactaaagaattacttactttagtagaaaatgatgtaaaaactaat
ggtataggtcaaaaacaatttttagattcaattaagaaaaatttagaagaaattcttagt
gttaaaggtaaaaatcaaggttttgtatttgctagtaagccacctacggttgttttgatg
tgtggtttacaaggtggtggtaaaactactactacggtaaaaattgctaattacttaaaa
ctaagaaataaaaaagtattaattgctgcatgtgacttgcaaagattagctgcggtagag
cagttaagacaactcactcaagctaatgagcttgatttgttttttatagaaaatgaaagc
aatcctttaaatgtagctaaacaagctttagaaaaagcaaaaaattctatgtatgatgtt
ttgcttgtagatactgctggtcgtttagcgatcgatacagctttgatgaatgagcttaaa
gaagtaaaagctattttaaatcctgatgaagtgttttatgtagctgatgctatgagtggt
caagatggtgttaaaacagcaagtagctttaatgaagctttagaaattacaggggttatt
ttaagtaaatttgatgcagataccaaaggtggtgttgcactaggtatagcaaaacaaatt
ggtgtgcctttaagatttattggtgttggcgagaaagtagctgatttagaagtgtttatc
cctgatagaattgttaatcgtatcatgggcgagggtgatttagcgactttggctgaaaaa
actgcagctattattgatgaaaaagaagcaaaaaaacttaataagaaaattaaaaaaggt
gaatttaattttaatgactttttaaatcaaatggaaagtgttaaaaaacttggtagtatg
aaatcaatcattggtatgatacctggtttatcatctatggcagcaaatattaaagatatt
gatttggataattctaaagaaattattcatattaaggcaatgatttcatcaatgacacca
aaagaaagagaaaatcctgatttgttaaacaacgcaagaaagcgtcgtattgcagagggt
gctggcttgtctcaaatggaagtaaatcgctttttaaaacaatttagcaatgcagctaag
ttggcaaagaaattttcaaacaaaaaaggaatggaaaactttatgaatatgttgcagcaa
gctaaaagaccacaataa
DBGET
integrated database retrieval system
