Campylobacter lari RM16701: UPTC16701_1115
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Entry
UPTC16701_1115 CDS
T03550
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
clr
Campylobacter lari RM16701
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clr03032
]
UPTC16701_1115 (gyrA)
03400 DNA repair and recombination proteins [BR:
clr03400
]
UPTC16701_1115 (gyrA)
Enzymes [BR:
clr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UPTC16701_1115 (gyrA)
DNA replication proteins [BR:
clr03032
]
Prokaryotic type
DNA Topoisomerases
UPTC16701_1115 (gyrA)
DNA repair and recombination proteins [BR:
clr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UPTC16701_1115 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJD05149
LinkDB
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Position
complement(1086800..1089388)
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AA seq
862 aa
AA seq
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MENIFTKDSDIENIDIESSIKSSYLDYSMSVIIGRALPDARDGLKPVHRRILYAMNDLGV
GSRSAYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQDFSMRYPSVDGQGNFGSIDGDGA
AAMRYTEARMTILAEELLRDIEKDTVDFIPNYDDSMSEPDVLPARVPNLLLNGSSGIAVG
MATNIPPHSLNELIDGLLYLIDNKNASLEEIMQFIKGPDFPTGGIIFGKKGIIEAYRTGR
GRVKVRAKTHIEKRANKDIIVIDELPYQTNKARLIEQIAELAKEKQIEGIAEVRDESDRE
GIRVVIELKRDAMSEIVLNNLFKSTTMESTFGVIMLAIHNKEPKVFSLIELLNLFLNHRK
TVIIRRTIYELQKARARAHILEGLKIALDNIDEVIALIKNSPDNPTAKNLLMEKFGLSEL
QSNAILDMKLGRLTGLEREKIDNELRELLAEIERLDQILKSETLLENLIKDELKEIRTKF
DVPRITQIEDDYDDIDIEDLIPNENMVVTITHRGYIKRVPSKQYEKQKRGGKGKVAVTTY
DDDFIESFFTANTHDTLMFVTDRGQLYWLKVYKIPEGSRTAKGKAVVNLINLQADEKIMA
IIPTTDFDESKSLCFFTKNGIVKRTNLSEYQNIRSVGVKAINLDENDELVTAIIVTRDEN
EIANVNASENLEIDENLENESSENSEELDNITSGKMLFAVTKKGMCIKFPLAKVREIGRV
SRGVTAIKFKEKDDEVVGAVVIENDAQEILSVSAKGIGKRTDAGEYRLQSRGGKGVICMK
LTTKTKDLIGIVIVDESMDLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSI
AKCPKEEDEELDTETNMDLNLE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatttttactaaagattcagatattgaaaatatagatatagaaagttctata
aaaagtagttatttagattattctatgagtgttattataggccgtgctttgcctgatgct
agagatgggcttaaacctgttcatagaagaattttatatgctatgaatgatttaggtgtt
ggaagtcgtagtgcttacaaaaaatcagcacgtatagtgggtgatgtaatcggtaaatac
catccacacggtgatacagctgtatatgatgctttagtaagaatggcgcaagatttttct
atgcgttatccaagtgtggatgggcaaggaaactttggttctattgatggtgatggtgct
gctgcgatgcgttatactgaagctaggatgacgattttagctgaagagcttttgcgtgat
atagaaaaagacacagttgattttataccaaattatgatgattctatgagtgaacctgat
gttttacctgctagggtgccaaatttattacttaatggttcaagtggtattgcagtaggt
atggctactaatattcctccgcatagtttaaatgagcttattgatggtttgctttattta
attgacaataaaaatgcaagcttagaagaaatcatgcaatttatcaaaggccctgatttt
ccaaccggtggtattatttttggtaaaaaaggtattatagaagcttaccgtacaggtcgt
ggtagggtaaaagtaagagcaaaaacccatattgaaaaaagagctaataaagatattatc
gtcatagatgaacttccttatcaaactaacaaagcaagattaatagagcaaattgctgaa
cttgctaaagaaaaacaaatcgaaggtattgctgaagttagagatgagagtgatagagaa
ggaattcgcgtggtgattgaactaaaacgcgatgctatgagtgagattgtgttgaataat
ctttttaaatctaccactatggaaagtacttttggtgtgattatgcttgctatacataac
aaagaaccaaaagttttttctttaattgaacttttaaatttattcttaaatcatagaaaa
actgtaattattagaagaacgatttatgagttgcaaaaagctagagctagggcgcatatt
ttagaaggtttaaaaattgcactagataatatcgatgaagtgatagccttgattaaaaat
tctcctgataatccaacggctaaaaatttattgatggaaaaatttggcttaagcgagctt
caatcaaacgcgattttagatatgaaattaggccgtttaacaggacttgagagagaaaag
attgacaatgaattaagagaattattagcagaaattgaaagacttgatcaaattttaaaa
agtgagactttacttgaaaatttaattaaagatgagttaaaagaaattagaactaaattt
gatgtgccaagaatcacccaaattgaagatgattatgatgatattgatatagaagattta
ataccaaatgaaaacatggtagttactatcacgcatcgtggttatattaaacgtgttcca
agtaagcaatatgaaaaacaaaaacgtggtggcaaaggcaaggttgcggttacaacttat
gatgatgattttatagaaagcttctttacagcaaacacgcatgatactttgatgtttgtt
actgatcgtggacaactttactggcttaaagtttataaaattcctgaaggaagtagaact
gctaaaggtaaagccgtggttaatcttattaatctacaagcagatgaaaaaatcatggcg
attatcccgacaactgattttgatgaaagtaaatcattgtgtttctttacgaaaaatggt
atcgtaaaacgcacaaatttaagtgagtatcaaaacattagaagcgtgggtgtaaaagcg
attaatttagatgagaatgatgagctcgttactgcaattattgtaacaagagatgaaaat
gaaatcgcaaatgtaaatgcaagtgaaaatttagaaatagatgaaaatctagaaaatgaa
agtagtgaaaacagtgaagaattagataatattactagtggtaaaatgctttttgcggta
actaaaaaaggtatgtgtattaaattcccacttgctaaagttagagagattggtcgtgta
agtagaggggtgactgcgattaaatttaaagaaaaagatgatgaggttgtgggtgctgtt
gttatagaaaatgatgcccaagaaatcttaagcgtaagtgctaaaggcataggcaagcgt
actgatgctggagaatacagacttcaaagcagaggtggtaagggtgttatttgtatgaaa
cttactactaaaacaaaagacttaatcggtatagttatagttgatgaaagtatggattta
atggcattaacaagtagtggtaagatgatacgcgttgatatgcaaagcattagaaaagca
ggtagaaacacaagtggtgtaattgttgttaatgttgaaaacgatgaggttgtaagcatt
gctaaatgtcctaaagaagaagatgaggaattagatactgaaactaatatggatttaaat
ttagaatag
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