Clostridium sp. SY8519: CXIVA_03510
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Entry
CXIVA_03510 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03420
Nucleotide excision repair
cls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CXIVA_03510
03430 Mismatch repair
CXIVA_03510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_03510
Enzymes [BR:
cls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXIVA_03510
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CXIVA_03510
MMR (mismatch excision repair)
Other MMR factors
CXIVA_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAK46318
UniProt:
F7V858
LinkDB
All DBs
Position
complement(364531..366696)
Genome browser
AA seq
721 aa
AA seq
DB search
MTFEEFQKQYGIHLNAQQEEAVKLTEGPVLLLAVPGSGKTTAVVTRLAYMIFCKGIAPER
ILTLTYTAAATRDMADRFSERFGAKLAQHLEFRTINGICARVIYFYGRQTGREAFRLVTD
EKEILHLLAEIYQQVEGGYATENDRKTVRTLITYIKNMMLTEEEIRRLDDTAQMKISAIY
QRYHGEMRKRGLMDYDDQMAYAYTILRRSPRTLQYFRSCYPYLCVDEAQDTSRIQHALIA
LLAGKQGNLFMVGDEDQSIYGFRAAYPQALLQFEQEHPGAKVLLMEENFRSARGIVQAAD
AFIQKNILRHQKKMRAHRTDRGIVRAIEVGSRYAQYSYLVKAAANCGNRTAVLYRDNESM
LPLADLLERNGIPYQVKNADPGFFTSRIVTDIRQIIQFARDPENTELFLQIYYKMGTYLS
KEKARAACSLSRERQIPVLDAAVRFLPLTSGTEKSVRHIRSQLQALLTDSADQGIRRIIR
DMGYAAYLDRAGINDNKLYILRSLSYGEASPESLLARLDELARILRYKENDPGCPFLLST
IHSSKGLEYDTVYLLDVADGIFPESIPLNPKQAKKEELEAYEEERRLFYVGVTRAKNRLY
LFRQKSRPSLFIRELMKGAGIPAQGKTEGTAERGTSGTAASGTARPAYVRSSAAGRSFHG
KPKETFEEFRAGIDTGGEVRHRVFGTGEVMAVTEDAVLIRFADQERKFLLRVLYEGNLLH
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgacatttgaagagtttcagaagcagtatgggatccatctgaacgcgcagcaggaagaa
gcggtgaagcttaccgaaggaccggtgcttctgctggccgttccgggcagcgggaagacc
acggcagtcgtgacccggctggcatacatgattttctgcaaagggatcgcgccggagcgc
atcctgaccctgacctatactgcggcggccaccagggatatggcagaccgtttttccgaa
cggtttggagcgaaattggcccagcatctggaattccgtaccattaacgggatctgtgcc
cgggtgatctatttttatggccggcagaccgggcgggaggcctttcgcctggtcaccgat
gaaaaagagatcctgcatctgctggcagagatctatcagcaggtggaaggcggatacgcg
acggaaaatgaccgcaagaccgtacggacactgattacctatatcaagaatatgatgctg
acagaggaagaaatccgcaggctggatgatacggcccagatgaagatttccgcaatttat
cagcgctaccacggagaaatgcggaaacgggggcttatggactatgatgaccagatggcc
tatgcctacaccatcctgcggcgcagtccccggactctgcagtatttccgcagctgctat
ccgtatctgtgtgtggacgaggcacaggacacctccaggattcagcatgcgctgattgcc
ctgctggccggtaaacagggcaacctgtttatggtgggggacgaggaccagagcatctac
ggattccgggcggcctatccccaggccctgctgcagtttgagcaggaacatccgggggca
aaggtgctgctgatggaggaaaattttcgttccgcccggggcattgtgcaggcggcagat
gcctttattcagaaaaatatcctcagacatcagaaaaaaatgcgggcacaccgcaccgac
agggggatcgtgcgagccatcgaagtgggaagcagatacgcgcagtacagttatctggtg
aaggcagcagccaactgcggaaaccgcaccgcagtgctgtaccgggacaatgagagcatg
ctgcccctggcagatctgctggagcgcaacgggattccctatcaggtaaaaaacgcggat
cccggattctttaccagcagaatcgtaacggatatccgtcagatcatacagtttgcccgg
gatccggaaaatacggaactgtttctgcagatttactataaaatgggaacctatctgagc
aaagaaaaggcccgggcggcctgcagcctgagcagggagcggcagattccggtgctggac
gcggcggtccggtttcttccgctgacttccgggacagagaaaagtgtccgccatatccgc
agtcagctgcaggcgcttctgacagattccgcggatcagggcatccgccggattatccgg
gacatgggatacgcggcctatctggaccgggccggtataaacgacaacaaactttatatc
ctgcgcagcctttcctacggggaagcgtcgccggaatccctgctggcccgtctggatgag
ctggcgcggattctgcggtataaggaaaatgatcccggctgtcccttcctgctgtctacc
attcattccagcaagggcctggaatacgatacggtctatctgctggatgtggcggacgga
atctttccggaatccatccccctgaatccgaagcaggcgaaaaaagaagagctggaagcc
tacgaagaagaacggcgcctgttttatgtgggagtcacccgggcaaaaaaccggctgtat
ctgtttcggcagaaatcccggccgtccctgtttatccgggaactgatgaaaggcgcggga
attccggcacagggaaaaacggagggaactgctgaacgaggaacatccgggacagcagcc
tcaggaaccgcacggccggcatatgtccgcagttctgctgcagggagaagcttccacgga
aaaccgaaagaaacctttgaagagtttcgggccgggattgacaccggcggggaggtgcgg
caccgggtgttcggtaccggggaggttatggcagtcacagaggatgcggtgctcatacgg
tttgcggatcaggagagaaaatttctgctgcgggtactgtatgagggaaacctgctgcat
cggtaa
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