Clostridium sp. SY8519: CXIVA_03670
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Entry
CXIVA_03670 CDS
T01565
Symbol
Nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXIVA_03670 (Nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_03670 (Nfo)
Enzymes [BR:
cls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CXIVA_03670 (Nfo)
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CXIVA_03670 (Nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAK46334
UniProt:
F7V874
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All DBs
Position
complement(380079..380918)
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AA seq
279 aa
AA seq
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MLTIGCHLSSSKGYLAMGQTALSIGASTFQYFTRNPRGGRAKPLDEKDAEAFVNFARENG
IHTPLAHAPYTLNGCSADPRVRAFARETMADDLARLQHIPGSCYNFHPGSHVRQGVDMGI
AYITEMLNEVLAPEQTTTVLLETMAGKGTEIGRSFEELRRILDGVELSSHLGVCLDTCHV
FDGGYDITENLDAVLREFDAVIGLERLKAVHLNDSKNPLGSHKDRHEKIGQGTIGAAACV
RIISHPALRNLPFYLETPNDLAGYEEEIRWLREHQKPAS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccatcggatgccacttatcctcatccaaaggctatctggccatgggacaaacc
gccctgtccatcggggccagtacatttcagtattttaccaggaatccccggggcggaagg
gcaaagcccctggatgaaaaagacgcggaagcgtttgtaaattttgcccgggaaaacgga
atccacaccccgctggcccacgcgccctacaccttaaacgggtgttccgcggatccgcgg
gtccgggcctttgcccgggaaaccatggcggatgatctggcccggctgcagcatattccc
ggcagctgctataattttcatccgggcagccatgtgcgccagggcgtggacatgggcatc
gcgtatatcacagagatgctgaatgaagtgcttgccccggaacagaccaccacggttttg
ctggaaaccatggcgggaaaaggcacggaaatcgggcgcagctttgaagaactgcggcgg
attctggacggggtggaattaagcagccacctgggcgtctgcctggatacctgccatgtg
ttcgacggaggctatgacattacagaaaatctggatgccgtgctgcgggaattcgatgcg
gtcatcgggctggaacggctgaaagccgttcatttaaatgacagcaaaaacccgctgggc
tcccataaggaccggcatgaaaaaatcggccagggaaccattggcgccgcagcctgcgtc
aggatcatcagccatccggccctcaggaatctgccgttctatctggagacccccaatgac
ctggccggatatgaggaggaaatccgctggctgcgggagcatcagaaaccggcgtcctga
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