Clostridium sp. SY8519: CXIVA_09270
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Entry
CXIVA_09270 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03030
DNA replication
cls03430
Mismatch repair
cls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CXIVA_09270
03430 Mismatch repair
CXIVA_09270
03440 Homologous recombination
CXIVA_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cls03032
]
CXIVA_09270
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_09270
Enzymes [BR:
cls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CXIVA_09270
DNA replication proteins [BR:
cls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CXIVA_09270
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CXIVA_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
TIP49
RuvB_N
AAA_22
AAA_30
AAA_19
AAA_7
AAA_5
AAA_16
AAA_14
AAA_18
AAA_assoc_2
DnaX_C
Mg_chelatase
Rad17
TsaE
DUF815
AAA_24
RCF1-5-like_lid
Viral_helicase1
RNA_helicase
PIF1
Hydantoinase_B
Motif
Other DBs
NCBI-ProteinID:
BAK46894
UniProt:
F7V2B5
LinkDB
All DBs
Position
complement(996581..998161)
Genome browser
AA seq
526 aa
AA seq
DB search
MSYMALYRKYRPDTFEDVKGQEHITTTLKNQIRAGRIGHAYLFCGTRGTGKTTVAKIFAK
AVNCENPQNGSPCGECPTCRAIADGTSMNVMEIDAASNNGVENIRQIKEEVTYAPTGGKY
RVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFHRISV
DTIADRLTELMAEEGTQVEERAIRYIAKAADGSMRDALSLLDQCISFYIGQTLTYENVLD
VLGAVDTEVFRKLFLRIMEDDVTGAVAVVEELILQGRELGQFVTDFIWYLRSLLLVRASD
QMEEVLDVSAENLALLRETAEQTEPEVIMRYIRVFSELSADMRYAAQKRVMLEIAIMKLC
RPEMEQTQDALLDRIARLERKMEQGIPVMPASAQPAGGIPARSAAEVKTEVPAIRPNAVP
EEIQQVVKNWHRIVPSFEGGLMRSYLNQAHLSLAGDNKLMLVFDDDMAYTYVSGDSNRKA
VSEAISRSIGKEVELLIKENQSGRAFEDNYVDLTKVIHMDVEEEDE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatggctttgtaccgcaaatatcggcccgacacatttgaggatgtgaaagga
caggagcatattacaactacattaaagaatcagattcgcgccgggagaatcggtcacgcc
tatctgttctgcggcacccgcggcacgggaaaaacgactgtagcaaagattttcgcgaaa
gcagtaaactgcgaaaatcctcaaaacggcagtccctgcggtgaatgtccgacctgcagg
gcgattgcggacggaacttccatgaacgtgatggaaatcgacgcggcatccaataatggc
gtggaaaacatccgtcagatcaaggaagaggtgacgtatgcgcctaccggcggcaagtac
agggtctatattattgacgaagtgcatatgctgtccatcggcgcgtttaacgcgctgctg
aagacgctggaagaaccgccctcttatgtaatatttatccttgcgaccacagaagcccac
aaaattccgattacgattctgtcccgctgccagcgttatgatttccacagaatctcggtg
gataccattgctgaccgtctgacggaactgatggcggaagaggggacacaggtggaagag
cgggccatccgttatatcgcaaaagcagcggacggctccatgcgggatgcgctgagcctc
ctggatcagtgtatttccttttatatcggacagacccttacctatgagaatgtcctggat
gtgcttggcgcggtggatacggaagtattccgcaaactgtttctgcgtatcatggaagat
gacgtaaccggcgcggttgccgtcgtggaagaactgattctgcagggcagggaactggga
cagtttgtgacggattttatctggtatttgcgcagcctgttgctggtacgggcatcggat
caaatggaggaggtcctggatgtttccgctgaaaacctggcgcttttacgggaaacggca
gaacagaccgaaccggaagtgatcatgcggtacatccgcgtgttttctgaactttcggcg
gatatgcggtacgcggcgcagaagcgggtcatgctggaaattgccattatgaaactgtgc
cgtccggagatggagcagacgcaggatgcgcttcttgaccggatcgccagactggagcgc
aaaatggagcagggcatcccggttatgccggcctccgcgcagcctgcgggcgggataccg
gctcggtctgccgcggaagtgaaaacagaggtcccggcgattcgcccgaatgccgtacca
gaggaaattcagcaggtagtgaagaactggcacagaatcgtgccgtcctttgaaggcggc
ctgatgcgcagctatctgaaccaggcacatctgagcctggcaggagacaataaattaatg
ctggtattcgatgacgatatggcatatacttatgtatcaggagactctaatcggaaagca
gtctctgaagcaatcagccggagcataggaaaagaagtagaacttcttattaaagagaat
cagtccggtcgggcatttgaagataattatgtggatctgaccaaggtcattcacatggat
gtagaagaagaggatgaataa
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