Clostridium sp. SY8519: CXIVA_09350
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Entry
CXIVA_09350 CDS
T01565
Symbol
SbcC
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cls
Clostridium sp. SY8519
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_09350 (SbcC)
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CXIVA_09350 (SbcC)
Archaeal homologous recombinant proteins
CXIVA_09350 (SbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
AAA_21
ABC_tran
RecR_ZnF
DUF3467
AAA_16
AAA_22
UBA_BRSK
Motif
Other DBs
NCBI-ProteinID:
BAK46902
UniProt:
F7V2C3
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All DBs
Position
complement(1005060..1007876)
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AA seq
938 aa
AA seq
DB search
MKPIKLTMSGFGPYADKQEIPFDRLEGCGLYLITGDTGAGKTTIFDAITYALYGEASGSS
RDDARMFRSKYADAHTATYVELLFSYHGKKYTVRRNPEYERPKTRGQGTTRQAAGAVLEF
SDGRPPVTKTQEVTRVITDLIGLDRVQFTQIAMIAQGDFLKLLLAKTEERSRIFRQIFHT
EPYRQLQQKLHGDTAALKNAYERAEAVLAQTIARIHPDTEKEEEQLQALGLHQRKEREQL
LEEMIHRDQKEADRLEQAYRDLDRRRNELQKEYSKAETDHRNREELRREEKILLEEQQKL
FSAKAVLQKETEKDPEREQLRIQIAEEEKRLPEYEELTRIQSAGQKAEENRKKDQAGIAA
EEARQEKQEKAYRQMLETRSSLKEVPQQLLREMHGLEQFQDREKLIRRISEQCRGIDREW
KEIHTAREEYQKELEAYRRMHDREGRLNQQFLNAQAGLLAQTLTDGEPCPVCGSTVHPSA
AELTREAPTEEMVSQAREQTAQQQERAGACSRRLGEMTARTGAHVRELAGNAARLFPELT
EETWIQIFRKAEEQQTWPEEFTVRFRAVFDQNKTQKAEYQKRIQMYRQQKKELDALEQKI
PESEDSLKQTQSRLEQWRQKQVRDQAEYENCRARLEECRRKLPFRSLQEARDQIIRQKAQ
LKQMTETRQQAEACYQECARAVDVRSGKTEALRKALEGSTPADRKELDTRRSDLEKEWNQ
LRDRQKTISLRLSENETVCKDLKMREKELTQLEEQQSWMMNLNATLNGTLSGKDKMMLET
YIQTHYFDRVIGRANTRFMQMSSGQYELKRRREASNQRSQSGLELNVLDHHNGSERSVRT
LSGGESFMASLSLALGLADEIQSTAGGIQLDTMFVDEGFGSLDEDTLNQAMRAFDDLSQS
GRQIGIISHVSELKERIRNQIVVTKDVCGKSRARIVQE
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatcaaacttacaatgtccgggttcggaccttatgcggataagcaggaaatc
ccctttgacagactggagggctgcggactttatttgattaccggggatacgggagccgga
aaaaccacgatttttgacgccattacctacgcgctgtacggggaagccagcggcagcagc
cgggatgatgccagaatgttccgcagcaaatatgccgatgcccatacggcgacttatgtg
gaattgcttttttcctatcacggaaaaaaatataccgttcgaagaaatccggaatatgag
cgtccaaagaccaggggacaggggacaaccagacaggcagcaggcgccgtactggaattt
tccgacggacggccgccggtgacaaagacccaggaagtgacccgggtgattacagatctg
atcggtctggaccgggtgcagtttacacagattgccatgattgcccagggggatttttta
aagcttctgcttgcgaaaaccgaagaacgcagccgtattttccgtcagatttttcatacc
gagccctaccgtcagctgcagcagaagctgcacggtgacacggcggcattgaagaatgcc
tacgaacgggctgaggcggtgctggcacagaccatagccaggattcatccggatacggag
aaagaagaggagcagctgcaggcactgggactgcatcagaggaaagaacgggaacagctg
ctggaggaaatgattcacagggatcagaaggaagccgaccgtctggaacaggcataccga
gacctggatcgtcggcggaatgagctgcagaaggaatattccaaagcggaaaccgatcac
aggaatcgggaagagctccgcagggaagaaaagattctcctggaagaacagcagaaactg
ttttcagcaaaggcagtgcttcagaaagaaaccgaaaaagatccggaacgggagcagctg
cggatccaaattgccgaagaagaaaaacggcttccggagtatgaggaactgacgcggatt
cagtctgccggacagaaggcagaagagaatcggaagaaggatcaggcgggcattgccgca
gaagaggcaaggcaggaaaagcaggaaaaggcataccggcagatgctggaaacccgcagc
agcttaaaggaagtgccccagcagctgctccgggaaatgcacggactggagcagtttcag
gacagagaaaaactgatccgcagaatatcggaacagtgccgcgggattgaccgggaatgg
aaggagatccatactgcgcgggaggagtatcagaaagagctggaagcctaccgccggatg
catgacagagaaggaagactgaaccagcagtttctgaatgcccaggcagggcttctggca
cagacattgacagacggggaaccatgtcccgtctgcggatctacggtacatccttccgcc
gcggaactgacccgggaagcaccgacagaagaaatggtcagtcaggcccgggagcagacg
gcacagcagcaggagcgggccggagcctgcagccgcaggctgggtgagatgacggcccgt
acgggagcccatgtccgggaactggccggcaatgccgcccgcctgtttccggaactgacg
gaggaaacgtggatacagattttccgcaaggcagaggagcagcagacctggccggaagaa
tttaccgtaagattccgcgcagtatttgatcaaaataaaactcaaaaagcggaatatcag
aaacgaattcaaatgtaccggcagcagaagaaagaactggatgccctggagcagaaaata
ccggaatcagaggattctctgaagcagacccagtcccggctggagcagtggagacagaaa
caggtcagagaccaggcagaatacgaaaactgccgggcgcggctggaagagtgccgccgc
aaactgcccttccgttcgctgcaggaggcgcgggatcagatcatccggcagaaggcacag
ctgaagcagatgacagagaccagacagcaggcggaagcctgttatcaggagtgcgccaga
gccgtggatgtccgcagcggaaagacggaggccctgcgaaaggcactggaaggcagtaca
ccggcagatcggaaggaactggataccagacggtcagacctggaaaaagaatggaatcag
ctgcgggacagacaaaagaccatatccctgcggctcagtgagaatgaaaccgtttgcaaa
gatctgaaaatgcgggaaaaggagctgacacagctggaggaacagcagtcctggatgatg
aacctgaatgccacactgaacgggaccctcagcggaaaagacaagatgatgctggagact
tatatccagacccattattttgatcgggtgattggccgggccaatacccgttttatgcag
atgagcagcgggcagtatgaattgaaacgcaggcgggaagccagcaaccagcgcagtcag
agcgggctggaactcaatgtcctggatcaccacaacggcagcgaacgcagtgtccgcacg
ctgtccggcggggagtcctttatggcgtccctgtcgctggcactgggactggcggatgag
attcagagcaccgcaggcggcatccagctggatactatgtttgtagacgagggcttcggc
tccctggacgaggatacactgaatcaggccatgcgggcctttgatgatctgagtcagagc
ggccggcagattggaatcatttcccatgtcagcgaattaaaggaaagaatccgcaatcag
attgtagtgacaaaagatgtctgcggaaagagcagagcgcgaattgtacaggaatag
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