Clostridium sp. SY8519: CXIVA_14710
Help
Entry
CXIVA_14710 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
cls
Clostridium sp. SY8519
Pathway
cls02020
Two-component system
cls02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CXIVA_14710
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CXIVA_14710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cls03021
]
CXIVA_14710
Transcription machinery [BR:
cls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CXIVA_14710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_26
HTH_IclR
HTH_32
DUF2774
DUF6381
Motif
Other DBs
NCBI-ProteinID:
BAK47437
LinkDB
All DBs
Position
complement(1586362..1587747)
Genome browser
AA seq
461 aa
AA seq
DB search
MNHKMQLELTQKQTISQQMLQYMDILQMSAAELEAHIEAVSMENPVLELADPDQPSRTDS
EIDRQRKLEWLESTDYQNKVYYQSDSSAEYSQENLHDISEDGKALSEYLNSQLMFFSYSP
EEQQILNYLIYSLDSKGYYTEDPAIPAAQFHVSEHTVLHLLQEIQNLDPAGVGARDLKEC
LVLQLHRKKNYSAITEQVILFHLDEVAKNHIPQIAKKMKVTTEDVLAACEEIRTFNPKPG
NSFSNREHLRYISPDAIVIKTDQEFDILINEYQYPRFSMNPFYVDLAKQTTDKTARKYLK
EKIQQIQSLSDSIGMRTSTLSKVMHALVTRQKLFFLRGPGNKVPMGLADLAEDTGLHEST
ISRTLHSKYLQCSWGVFPLNYFLTPVASVSRTSGEEQTQEHILAKIREIIDREDKKKPLS
DEAIRKELEQFDISISRRTVNKYRQELGIPDKTGRKEYHTQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaaatgcagcttgaactgacccagaagcagaccatatcccagcagatgctc
cagtatatggacatcctgcagatgagcgcagccgaacttgaagcccatatcgaagcggtt
tccatggagaatccggtactggaactggcggatccggatcagccgtcccgcacagattcc
gaaatcgaccggcagcgcaagctggagtggctggaatccaccgattatcagaacaaagta
tactatcagtccgacagttctgccgaatattcccaggaaaatcttcacgacatttccgaa
gatggaaaagccctgtccgaatacctgaattcccagctcatgttctttagctacagcccg
gaagaacagcagatcttaaactatctgatctattccctggattccaagggatactatacc
gaagatccggcgattcccgccgcccagttccatgtgtcagagcatacggtgcttcatctg
ctgcaggagatccagaacctggatcctgccggagtcggtgcccgggacctgaaagaatgc
ctggtgcttcagcttcaccgcaagaaaaattactccgccatcaccgaacaggtcatcctg
ttccatctggacgaagtcgccaaaaaccacatccctcagatcgcaaagaaaatgaaagtg
accaccgaagatgtgctggccgcctgtgaggagatccgcaccttcaatccgaagcccggc
aactccttcagcaaccgggaacacctgcgctacatcagtccggatgccattgtcatcaag
acagaccaggaattcgacatcctcatcaacgaataccagtatccccggttttccatgaat
cctttctatgtggatctggccaaacagaccacggacaaaaccgccagaaaatatctgaag
gaaaagatccagcagatccagagcctgtcggacagcatcggcatgcgcacttccaccctg
tccaaagtcatgcacgccctggtgacccgtcagaagcttttcttcctgcggggacccggc
aacaaagtgcccatgggacttgcggatctggcggaagataccggtcttcacgaatccacc
atcagccggaccctccacagcaaatatctgcagtgcagctggggcgtatttccgctgaat
tatttcctgacaccggtcgcttctgtctcccgcacttccggggaagagcagacccaggaa
cacatcctggccaaaatccgggaaatcatcgaccgggaagacaaaaagaaacccctgagt
gatgaagccatccgcaaagagctggaacagttcgacatctccatctcccgccgcacggtc
aacaaataccggcaggaactgggcatcccggacaaaaccggccggaaagaataccatacc
cagtga
DBGET
integrated database retrieval system
