Clostridium sp. SY8519: CXIVA_16780
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Entry
CXIVA_16780 CDS
T01565
Symbol
CarB
Name
(GenBank) carbamoylphosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls00220
Arginine biosynthesis
cls00240
Pyrimidine metabolism
cls00250
Alanine, aspartate and glutamate metabolism
cls01100
Metabolic pathways
cls01110
Biosynthesis of secondary metabolites
cls01240
Biosynthesis of cofactors
Module
cls_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CXIVA_16780 (CarB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CXIVA_16780 (CarB)
00220 Arginine biosynthesis
CXIVA_16780 (CarB)
Enzymes [BR:
cls01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CXIVA_16780 (CarB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
BAK47644
UniProt:
F7V4G5
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Position
1816968..1820171
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AA seq
1067 aa
AA seq
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MPKNPEIKKVLVIGSGPIIIGQAAEFDYAGTQACRSLKEEGVEVCLVNSNPATIMTDKQI
ADQVYIEPLTVDVLKQIILKEKPDSVLPTLGGQAGLNLGMELAESGFLEENGVKLIGTTA
ETIRRAEDRLEFKQTMEKLNEPVAASQVVHNVEDGIRFTNTIGYPVVLRPAFTLGGSGGG
IAHNETELVKILENGLRLSRVGEVLVERCIAGWKEIEYEVMRDAAGNCITVCNMENIDPV
GVHTGDSIVVAPSQTLGNPEYQMLRTSALNIISELKITGGCNVQYALNPDSFEYCVIEVN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIKNAITDKTYASFEPMLDYCVVKIPRL
PFDKFITAKRTLTTQMKATGEVMSICTNFEGALMKAIRSLEQHVDSLVTDEYSGLSYEKL
MERLAVVDDRRIWVIAEAVRRGVSYDKIYEITKIDRWFIDKIAILVEMEGRLRSEELTPE
LLREAKRIEFPDGVIASLTGKSEEEVRQMRHANGITASFKMVDTCAAEFEAATPYYYSCY
DGENEAMETHPKKKVLILGSGPIRIGQGIEFDFCSVHCTWAFAKRGYETIIINNNPETVS
TDFDIADKLYFEPLTPEDVENVVNIEKPDGAVVQFGGQTAIKLTESLMKMGVPILGTRAE
DVDAAEDRELFDQILQKTGIPRAAGGTVFTSAEAKEVANRLGYPVLVRPSYVLGGQGMHI
AFNDGEIVEFIDEINKIAQDHPILIDKYLMGKEIEVDAVCDGTDILIPGIMEHIERTGVH
SGDSISVYPAPTISEEVKKTLVDYTGRLAQALHVVGLINIQFIVMHDEVYVIEVNPRSSR
TVPYISKVTGIPIVDLAARVIMGETIRGMGYEPGLAPEADYIAIKMPVFSTEKLRGAEIS
LGPEMKSTGECLGIAKNFNEALYKAFLGAGVRLPKYKQMIMTVRDADKPEAVGVAKRFEK
LGYRIYATRSTARYLQEHGVDARQVNKISQESPTVMDLLLGHKIDLVIDTPTQGRDKSRD
GFLIRRTAIETGINCLTSMDTANALARSLETAQDSMTMIDIAKVKNL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatccggagattaaaaaggtcttagtcattggttccggcccgatcattatc
ggacaggcagcagagtttgattacgcgggcacccaggcctgccggtcgctgaaggaagaa
ggcgtggaagtatgcctagtcaattccaatccggcgacaattatgacagataagcagatc
gcggatcaggtctacattgagccgcttaccgtggatgtattgaaacagatcatcttaaag
gaaaaaccggacagcgttctgccgaccctgggcggccaggcgggactgaatctgggcatg
gagctggcggaatccggcttcctggaagaaaacggcgtaaaactgatcggaactacggcc
gagaccatccgccgggcggaagaccgtctggaatttaagcagaccatggaaaaactgaac
gagccggtggccgcctcccaggtcgtgcacaatgtggaggatggaatccggtttacaaac
accatcggctatccggttgtgcttcgccccgcgtttaccttaggcggcagcggcggcgga
attgcccacaatgagaccgaactggtgaaaatcctggaaaacggcctgcggttaagccgt
gtgggcgaagtgctggtagagcgctgcattgccggctggaaagaaatcgaatatgaagtg
atgcgggacgcggcaggaaactgtatcacggtctgcaatatggaaaatatcgacccggtg
ggcgtacacacaggcgactccatcgtagtggcgccgtcccagaccctgggcaacccggaa
taccagatgctgcgtacttccgcgctgaatattatcagtgagttaaagatcaccggcggc
tgcaatgtacagtatgccttgaacccggacagctttgaatactgcgtcatcgaggtgaat
ccccgtgtcagccgttcttcggcgctggcatccaaggcaacgggctatcccattgcgaaa
gtggcagccaagattgccctgggttacacactggatgagatcaagaacgcgatcacagat
aaaacctacgcaagctttgagcccatgctggattactgcgtggtaaagattccccgcctg
ccctttgataaattcattaccgcgaaacggaccctgaccacacagatgaaggccaccggc
gaggtaatgagcatatgcactaattttgaaggcgcgctgatgaaggccattcgttcgctg
gaacagcatgtggattccctggtaaccgatgagtattccggcctgtcatatgaaaaactc
atggaacggctggcagtggtggatgacaggagaatctgggtgatcgcggaagcagtccgc
cgcggggtttcctacgacaaaatctacgagattacaaaaatcgaccgctggttcatcgat
aaaatagccatcctggtggagatggaaggccgtctgcgcagcgaagagctgacaccggaa
ctgctccgggaagcgaaacgcatcgaattcccggacggcgtcattgcctccctgacaggc
aaatcagaagaagaagtcagacagatgcgccatgccaacggcatcactgcatccttcaaa
atggtggatacctgcgcagcggaatttgaggcagccacaccctactactattcctgctat
gacggtgagaatgaggccatggaaacgcatccgaaaaagaaagtgctgattctgggatcc
ggccccatccgcatcggccagggaattgagtttgatttctgctcggttcactgtacctgg
gcttttgcgaaacgcggctatgagaccattatcatcaacaacaatccggagacggtatcc
acagattttgacattgcggacaagctgtattttgagccgctgaccccggaagatgtggaa
aatgtggtaaatatcgaaaaaccggatggcgctgtcgtgcagttcggcggacagactgcc
attaaactgaccgaaagcctgatgaaaatgggcgtgccgattctggggacccgggcagag
gatgtggatgcagcggaagaccgggagctcttcgatcagattctgcagaaaaccggtatc
ccacgggcggccggcggtacggtatttacttccgcggaggcaaaagaagtagcaaaccgt
ctgggttatccggtattggtgcggccttcctatgtactgggcggccagggcatgcacatt
gcctttaacgatggtgaaatcgtggaatttattgatgagatcaacaagatcgcccaggat
cacccgattttgattgataaatatctgatgggaaaggaaattgaagtagatgccgtctgc
gacggcaccgatatcctgattccgggtattatggagcatatcgagcgtaccggcgtgcat
tccggagacagtatttccgtatatccggcgcccaccatcagcgaagaagtcaaaaaaaca
ctggtggactataccggacgcctggcacaggcgctccacgtggtgggactgatcaacatc
cagtttatcgtgatgcatgacgaggtatatgtgatcgaggtaaatccccgttcttccaga
acggtaccttatatcagcaaggtaaccggtattcccatcgtcgatctggcagcacgtgtc
attatgggtgagaccatacgcggcatgggatatgagccgggactggcaccggaggcggat
tatattgccatcaagatgcccgtcttctccacagagaagctgcggggcgcagagatcagc
ctgggaccggagatgaaatccaccggcgaatgtctgggcattgcaaagaatttcaacgaa
gcgctgtacaaggcatttctcggcgccggcgtccgtctgccgaaatacaagcagatgatt
atgacggtcagagacgcggacaaaccggaggcagtgggagtcgcaaagcggtttgaaaag
cttggctaccggatctacgccaccaggagtacggcccgttatctgcaggagcacggcgtg
gatgcccgtcaggtaaacaagatctcacaggaatctcctacggtaatggaccttctgctg
ggacataaaatcgatcttgtcatcgacacaccgacccagggacgggacaagagccgggac
ggattcctgatccggcgtacggctattgagacgggaattaactgcctgacttccatggat
accgcgaacgccctggcccgcagcctggagaccgcgcaggattccatgaccatgattgat
atcgcaaaagtaaaaaatctgtaa
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