Clostridium sp. SY8519: CXIVA_16900
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Entry
CXIVA_16900 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03420
Nucleotide excision repair
cls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CXIVA_16900
03430 Mismatch repair
CXIVA_16900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_16900
Enzymes [BR:
cls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXIVA_16900
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CXIVA_16900
MMR (mismatch excision repair)
Other MMR factors
CXIVA_16900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAK47656
LinkDB
All DBs
Position
1832139..1834367
Genome browser
AA seq
742 aa
AA seq
DB search
MSKYDMLNPEQREAVFYTEGPLLILAGAGSGKTRVLTHRAAYLIEEKGVNPYHILAITFT
NKAAGEMRERIDDMVGFGAESIWVSTFHSCCVRILRRYIDRIGYDNNFSIYDADDQKHVM
KEIVKRLNINTKMYKERAFLNAISSAKDELIGPEEYKSRTGGDLPKEQTARVYREYQEVL
RKNNALDFDDLIFKCVELLQKDPQVLESYQERFQYIMVDEYQDTNTAQFQLIRLLAGKYR
NLCVVGDDDQSIYRFRGANIQNILSFEEQYPDAKVIKLEQNYRSTQNILDAANAVIKNNR
GRKDKALWTEEQGGEKVHFQQFETAYEEADFIAGDVARLERKGIFDYGESAVLYRTNAQS
RLLEEKFVSRNIPYRIIGGVNFYSRKEIKDILAYLKTIDNGSDDLAVKRIINIPKRGIGA
TSINRVQTYADEQGISFFEACRMTEQIPKIGKAAGKIQGFVNLIRVLRAEIPELGIQRVT
EKLLEETGYVEDLKAEHDEEADARIENIDELISKIADYEDTAEEPTLGEFLDEVSLVADI
DSLEDDKNYVTLMTLHSAKGLEFPNVYMAGMEDGLFPSYMTITADDPTELEEERRLCYVG
ITRAKKRLTMTAARTRMQRGEMQYNRTSRFLKEVPEELLEGQLVKQKERPIYQQANTGYA
AARKALHGKDSYAAMRPRKEFGNASEIPKPAYQVGDRVRHKKFGDGTVTAMTAGGRDYEV
TVDFDTAGTKKMFALFAKMVKL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaatacgatatgttgaatccggaacagcgggaagcggtattctatacggaaggc
ccgcttctgatccttgcgggtgccggatccggaaaaaccagagtgctgacccaccgcgcg
gcctatctgatcgaagagaagggggtaaatccttaccacatcctggcgattacatttacc
aacaaagcagcgggtgagatgcgggagcggattgatgacatggtgggattcggcgcggag
agtatctgggtgtccacttttcactcctgctgcgtgcggattctgcgcaggtacattgac
cggatcggctatgacaacaatttttccatttatgatgcggatgatcagaagcatgtgatg
aaagagattgtcaaacggctgaatatcaacaccaagatgtataaggagcgggcgttttta
aatgccatttcttccgcgaaagatgagctgatcggaccggaggaatacaaaagccggaca
ggcggcgatctgcccaaagagcagaccgcgcgggtctaccgggaatatcaggaagtactg
cgtaagaataacgcactggattttgacgacttgattttcaaatgcgtggaactgctgcag
aaggatccccaggtgctggaatcctatcaggagcgttttcagtacattatggtggatgaa
taccaggacaccaatacggcgcagtttcagctgatccgtctgctggcaggcaaataccgg
aatctctgcgtggtaggagatgatgaccagtccatttaccggttccggggagccaacatt
cagaatattttaagcttcgaggagcagtatccggatgcgaaagtcattaagctggagcag
aattaccgctccacgcagaatattctggatgcggcaaacgcggtgatcaaaaacaacagg
ggacggaaggacaaggccctctggacagaagaacagggcggggaaaaagtgcatttccag
cagttcgaaacagcttatgaggaagcggattttatcgcgggagatgtggcccggctggaa
cggaaaggaatctttgactacggggaaagcgcggtgctgtaccgcaccaatgcccaatcc
cgtctgctggaagagaaatttgtcagcagaaacattccctatcggatcatcggcggcgtg
aacttttactccagaaaagagatcaaggacattctggcgtatttaaagaccatcgacaac
ggcagcgacgatctggcggtgaaacggatcatcaatattccgaagcggggcatcggcgcc
accagcatcaaccgtgtgcagacctatgcggatgaacagggcatcagctttttcgaggcc
tgccgcatgaccgagcagatcccgaagatcggcaaggcagcagggaaaatccagggcttt
gtcaacctgatccgtgtcctgcgggcggaaatcccggaactgggcattcagcgggtgacg
gagaagctgctggaagaaacgggctatgtggaggatctgaaagcagagcatgacgaagaa
gcagacgcgcggattgagaatatcgatgaactgatcagcaaaatcgcggattatgaggat
acggcggaagagccgacactgggagaattcctggacgaagtgtcactggtggcggatatt
gacagcctggaagatgacaagaattatgtcacgctgatgaccctgcacagcgccaagggg
ctggagttccccaatgtgtatatggcaggcatggaagacggactttttccgagctatatg
accattaccgcggacgatcccacagagcttgaagaggaacgccggctgtgttatgtggga
atcacccgggcgaagaaacgcctgacgatgacggcggcccgtacccggatgcagcgggga
gaaatgcagtataaccgtacctcacggttcctgaaggaagtaccggaagaacttctggaa
ggtcagctggtgaaacagaaggaacgtcccatatatcagcaggccaataccggatacgcg
gcagcccgcaaggcgcttcacggcaaggattcctatgcggccatgcggccccggaaggag
ttcggcaatgcgtcggaaatcccgaagccggcctatcaggtgggagaccgggttcgtcac
aagaagttcggggacggtacggtgactgccatgacagccggcggccgtgattatgaagta
acggtggattttgatacagccgggacgaaaaaaatgtttgcgctgtttgcaaagatggtg
aaactgtga
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