Clostridium sp. SY8519: CXIVA_17270
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Entry
CXIVA_17270 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cls
Clostridium sp. SY8519
Pathway
cls02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CXIVA_17270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cls02000
]
CXIVA_17270
Transporters [BR:
cls02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CXIVA_17270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_23
AAA_22
AAA
AAA_18
RsgA_GTPase
NTPase_1
MMR_HSR1
AAA_16
TsaE
AAA_14
NB-ARC
AAA_28
KAP_NTPase
nSTAND3
DO-GTPase2
Septin
AAA_29
NACHT
SRP54
ABC_membrane_2
Spore_III_AA
AAA_7
SRPRB
ATPase_2
cobW
Rad17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAK47693
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All DBs
Position
1869953..1871755
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AA seq
600 aa
AA seq
DB search
MSRGFRRGGAQKPQKEKQNAMDTSSSMAVLKKVLAVIGRYKALLAASIVMAAVSVIIQLY
IPNLYGDAIDGIVAKHRVDFSLVAWYGLRIAVLMVLAALATWIMNIINNRLTFRTVRDIR
ARAIRQIQDLPLSYLDSHSSGDIVQRVIADIDQLSDGLLLGFTQLFSGIVTIIATLVFMF
QRDIGITVLVIVMTPLSFFVARFISTRSFRMFQKQTAVRGRQTALINEMVGSEKVVKAFG
HEETASEQFRKVNLELQEYSQKAVFFSSLTNPGTRAVNNVIYALVALVGAFRILGGNLTV
GGLTVLLSYANQYMKPFNDISSVITELQNALACAARVFALIEAEPMSKEPDRELQVAQGS
VAIEHAAFSYEKTKPLIQDFNFRAEPGMTVAIVGPTGCGKTTLINLLMRFYDVDEGKISV
DGQDIYQVTRQSLRRGYGMVLQETWLKQGTVRENIAFGRPEASEEEIIQAAKEAHSWEFI
RRMPEGLDTVIDDDSLSQGQKQLLCITRIMLTLPPMLILDEATSSIDTRTEIRIQEAFSK
MMKGRTSFIVAHRLSTIRSADRILVMKEGKIIEQGTHEELMAANGFYTSLYNSQFAGTAS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggattccgacgtggcggcgcgcagaagccgcagaaagaaaaacagaatgcc
atggatacgtcttccagcatggcagtgttaaagaaagtgctggcagtcatcggccggtat
aaggcgctgctggcagccagcattgtgatggcggctgtctctgtcatcattcagctgtat
attccgaatctgtacggcgatgccattgacggcatcgtggcgaaacaccgggtggatttc
tccttggtggcctggtacgggcttcgcattgcggtgctgatggtgctggccgcactggcg
acctggatcatgaacatcatcaacaaccgtctgacgtttcggactgtcagggatatcaga
gcccgggcgatccgccagattcaggatcttcctctgtcttatctggattctcacagttcc
ggggatattgtgcagcgtgtcatcgcggacatcgatcagctgtcggatggcctgctgtta
ggatttacgcagctgttttccgggattgtcacgatcattgccacactggtctttatgttc
cagagagatatcggaatcaccgtgctggtgattgtgatgacccccctgagcttttttgtg
gcccgttttatttccacccgttcgttccggatgttccagaaacagacggcagtccggggc
cggcagacggcgctgatcaacgaaatggtcggcagcgaaaaagtggtgaaggctttcggc
catgaagaaacagcctcggaacagttccgtaaagtgaacctggaactgcaggaatactcc
cagaaggcggtgtttttcagctccctgaccaatccgggcacccgggcggtaaataatgtg
atttatgcgctggtggcactggtaggcgcctttcggatcctgggcggcaatctgaccgta
ggcggtctgaccgtgcttttgtcctacgcgaaccagtacatgaagccttttaatgatatc
agctcagtgattacggagctgcagaacgcgctggcctgcgcggcccgggtattcgcgctg
atcgaggcggaacccatgagcaaagagccggatcgggaactgcaggtggctcagggcagt
gttgccattgaacatgcggcgttttcttatgagaaaacaaaaccgctgattcaggacttt
aatttccgggcagagcctggtatgaccgtggcgattgtgggtccgaccggatgcgggaaa
accacactgatcaacctgctgatgcgtttttacgatgtggatgaagggaagatttctgtg
gatggacaggatatttaccaggtgacccggcagtccctgcggcgcggatacggtatggtt
ctgcaggagacctggctgaaacagggaaccgtgcgggagaatatcgctttcggacggccg
gaggcatccgaagaggaaatcattcaggcagccaaagaggcccatagctgggaatttatc
cgcaggatgccggaagggctggacacggtgattgacgatgacagtctgagccagggacaa
aaacagctgctgtgtatcacccggatcatgctgacgcttccgcccatgttgattctggac
gaggcgacttccagtattgatacccggacggaaatccggatccaggaggcattcagcaag
atgatgaaaggacggaccagcttcattgtggcacaccggctttccaccattcgcagcgcg
gaccggattcttgtcatgaaagagggaaaaatcattgaacagggaacccatgaggaactg
atggcagccaatggtttttatacgtcactgtataattcccagtttgccggcaccgcttca
tga
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