Clostridium sp. SY8519: CXIVA_22830
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Entry
CXIVA_22830 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cls
Clostridium sp. SY8519
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cls03009
]
CXIVA_22830
Enzymes [BR:
cls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CXIVA_22830
Ribosome biogenesis [BR:
cls03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CXIVA_22830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Flag1_repress
YpuD_C
Motif
Other DBs
NCBI-ProteinID:
BAK48250
LinkDB
All DBs
Position
complement(2490588..2491556)
Genome browser
AA seq
322 aa
AA seq
DB search
MEEFIIGKHQAGQKSFKYLSKLLGGASSGFLHKMMRKKNIVLNDRKMTGQEILREADSIK
IYFSHDTFVKFASHTPAEDFAKPNADPRYRREQIPVVYEDADILVLNKPAGMLSQKAKPT
DYSVNEWILSYLLETGSLRKEDLRDFRPSVCNRLDRNTSGLILAGKTIAGLQELSRLLKD
RTAAKYYRCVVCGTMQEGRHLTGWLAKDRKTNRVSVSDQELPGSVRIETVYEPIQFLEGC
TELRVHLITGRSHQIRAHLASVGHPILGDPKYGDAQRNQEWRRRTGLNRQLLHAWRMEFP
DGTTVTADVPADYQTVVKECAR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagtttattatcgggaaacatcaggccggacagaaatccttcaaatatctttcc
aagctgcttggcggtgcatcttccggatttctgcacaaaatgatgcggaaaaagaatatt
gtcttaaatgaccggaaaatgaccggccaggaaatcctgagagaagcggattccatcaaa
atctatttttcacatgacacgtttgtaaaattcgcgtcccatacgccggcagaagatttt
gcaaaaccgaacgcagatccacggtaccgccgggaacagatccctgtggtatatgaagac
gcagacatcctggtactgaacaaaccggcgggcatgctttcccagaaggcaaaaccgaca
gactattcggtaaacgaatggatcctttcctatttgctggagaccggaagcctccggaaa
gaggatctccgtgattttcggccgtccgtctgcaaccgtctggaccgcaatacctccgga
ctgattctggcaggaaagaccatcgccggcctgcaggagctgagccgtctgctgaaagac
cgtaccgcggcaaaatattatcgctgtgtcgtatgcgggaccatgcaggaaggccgtcat
ctcaccggatggctggccaaagaccggaaaaccaaccgggtttccgtatcggatcaggaa
ctgccgggcagtgtccggatcgaaacggtctatgaacccatacagtttctggagggctgt
accgaactccgcgtgcatctgattaccggaagatcccaccagatccgggcacacctggcc
tcggtggggcatccgattctgggagatcccaagtacggggatgcccagcgtaatcaggag
tggcgccgccgcaccggcctgaaccgtcagcttctccatgcctggcgcatggaatttccg
gacggaaccacagtaactgctgacgttccggcagattaccaaacagtagtaaaggagtgc
gcccgctga
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