Clostridium sp. SY8519: CXIVA_22960
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Entry
CXIVA_22960 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CXIVA_22960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_22960
Enzymes [BR:
cls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXIVA_22960
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CXIVA_22960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_dom3_C
RecG_wedge
ResIII
Cas3-like_C_2
SecA_DEAD
SLFN-g3_helicase
IMS_HHH
ERCC3_RAD25_C
DNA_pol_lambd_f
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAK48263
LinkDB
All DBs
Position
complement(2500570..2502627)
Genome browser
AA seq
685 aa
AA seq
DB search
MQAQEPIEAIRGIGKKTAEYYHALGIFSIRDLLLYFPRDYEQYPPVREPDACVSGTMTAL
HLQVMRPPVVNAKTPKKTAIMDVPASFGRIRMIWFRMPYIRSLLQRGRDYVFYGRLIQKN
RDYFLEQPKIYTPEEYAALAQTIQPVYALTKGLKNQAVRKAVTAVLEDLPRDMEYLPEDI
RQRHHLMPYDFAVRNMHFPEDETACIAARTRFAFDEFYLFLLQMHRSRSQTLQEPNSFSF
VDDGFTDRRIRQLPYALTHAQLRTLREVQADMRGASVMQRLIQGDVGSGKTIVAFLAMLD
AVHSGYQAAIMAPTDVLARQHYQKLTDFCQRAGADCEVVLLTGSLQAAARREALEKIRTG
QGALIVGTHALIQDAVAYRRLALVVTDEQHRFGVRQRAAFAAKGEHPHILVMSATPIPRT
LAIILYGDLDISVIDELPARRLPVKNCVVTGSYRQKAYAFIEKELQAGHQAYIVCPLVEE
SEGMDGENVTDYSRRLREYYNGNYQVGVLHGKMKPDEKNRIMEQFLEQKIQILVATTVIE
VGVDVPNATVMMIENAEHFGLAQLHQLRGRVGRGDLQSYCIFMQGNQGKEKNPRLEILNH
SNDGFEIAREDLKLRGPGEFFGIRQSGSFSFQVGDVFRDMKLLQDAAREAADTLREDPDL
TRPEHIRLAQRLEELQQADGTDLNL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacaggaaccgatcgaagcaatccgtggaatcggaaaaaaaacagccgaatat
tatcatgcactggggattttcagtatccgggatttgctgctgtattttccaagagattat
gagcagtatccgccggtccgcgaaccggatgcctgtgtgtcgggaacgatgacggcgttg
cacctgcaggtgatgcgtccacctgtggtaaacgcgaaaaccccgaaaaaaacagccatc
atggatgtaccggcctccttcggccgcatccgtatgatctggttccggatgccgtatata
cgttctttgctgcagcggggacgcgactatgtgttttacggccggctgatacagaaaaac
agggattatttcctggaacagccgaaaatttacacaccggaagaatatgctgccctggcg
cagaccatccagccggtgtatgcccttacaaaaggtctgaaaaatcaggcagtacggaag
gcggtgacggcagttttggaagatctgccccgggatatggaatatctgccggaggacata
cggcagagacaccatctgatgccttatgattttgcggtccgcaacatgcatttcccggag
gatgaaaccgcctgtatcgcggccagaacccgtttcgcctttgatgaattctatctgttt
ctgctgcagatgcatcgttcccggtcccagacccttcaggaacccaacagtttttccttt
gtggatgacggatttacggaccgccggatccggcagctgccctatgccctgacccatgct
cagctgcgtacgctgcgggaagtgcaggcagacatgcggggcgcatcagtgatgcagcgc
ctgatccagggggatgtgggatccggaaaaaccattgtcgcttttcttgccatgctggat
gcggtgcacagcggttaccaggcggcgattatggcgcctaccgatgtgcttgctcggcag
cattatcagaaactgaccgatttctgtcagcgcgcgggggcggactgcgaagtcgtgctg
cttaccggttccctgcaggcagctgcccgcagggaagcgctggaaaaaattcgcaccgga
cagggcgccctgattgtcgggacccatgcgctgattcaggacgctgtcgcataccgccgg
ctcgcgctggtggttaccgatgaacagcaccgattcggtgtccggcagcgggctgccttc
gcggccaagggcgaacatccccatattctggtgatgagcgcgacgccgattccgcgtaca
ctggccattattctttacggagatcttgatatttctgtcatcgatgaactgcctgcccgc
cggctgccggtaaaaaactgtgttgtgaccggttcctaccgtcagaaagcctatgcattt
attgaaaaggaacttcaggccggccatcaggcctacattgtgtgtccccttgtggaagag
tccgaagggatggacggggagaatgtgacagactattcccggcggctgcgggaatactat
aacggaaactatcaggtgggcgtcctgcacggaaaaatgaaaccggacgaaaaaaaccgg
attatggaacagtttctggagcagaaaatacagattctggtggcgactacggtgattgaa
gtaggcgtggacgtgccgaatgccaccgtaatgatgattgaaaacgcggagcacttcggc
ctggcgcagctgcatcagctcaggggacgggtcggacggggggatcttcagtcttactgt
atttttatgcagggaaaccagggcaaagaaaaaaatccccgtctggagattctgaatcat
tccaacgatggatttgaaattgcccgggaagatttaaaactgcggggtcccggtgagttt
ttcggtatccggcagagcggatccttttcctttcaggtgggcgatgtctttcgggatatg
aagctgctgcaggatgccgcccgggaagccgcggatacgttgcgggaggatccggatctg
acccggccggaacacatccgcctggcacagcgcctggaggagctgcagcaggcagatggg
acggatttaaatctgtaa
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