Clostridium sp. SY8519: CXIVA_23460
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Entry
CXIVA_23460 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03030
DNA replication
cls03430
Mismatch repair
cls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CXIVA_23460
03430 Mismatch repair
CXIVA_23460
03440 Homologous recombination
CXIVA_23460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cls03032
]
CXIVA_23460
03400 DNA repair and recombination proteins [BR:
cls03400
]
CXIVA_23460
Enzymes [BR:
cls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CXIVA_23460
DNA replication proteins [BR:
cls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CXIVA_23460
DNA repair and recombination proteins [BR:
cls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CXIVA_23460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
HHH_6
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
BAK48313
UniProt:
F7V6D4
LinkDB
All DBs
Position
complement(2548535..2553022)
Genome browser
AA seq
1495 aa
AA seq
DB search
MEKLFSDVFCELQLTEDMQTFLKDVSVSRVTTNREHTRLRVYMESPHLIDKMRIFQLQDL
ISRQLFHKKMEVIIIEKFHLSAQYNLKFLVNAYWDSIKTEIRNYSKVLYTVIRKAKLTFP
EDGALELELEDTIPARQQETELCRILEKIFCERCGLDARLHITYRAHEDSRTLQNAEIQL
KNKIHLISQRVQDSHAEERPDAGQAPGAPDTETARNGKKAAPDSGHTANTRPSAGAFKGK
RFSGNGARRAGWNPMETDSKNLVYGRDFDGEAVEMSQVDESMGDVILRGKILSFEMRDTR
KGERKMVIFTITDFTDTFTVKMFPKVEWADEFAARVKKGGFYKLKGVASIDRFDGELSIS
SVTGIRKIPDFTATRMDTSPVKRVELHCHTKMSDMDGVSEVGDIIARAASWGHPAIAVTD
HGDVQAFPEANHAMEHVPKDFKVIYGMEAYLVDDLKGLVTNPAGQNFQDPFVVFDLETTG
LSASACRIIEIGAVKVEQGRITDRFSTFVNPQEPIPYHIEQLTSINDAMVMDAPVIRQAL
PEFMEFCEGCMMVAHNADFDMGFIQRNCAEQGIPCEKTILDTVMLARYLLPQLNRFKLDT
VAKALKVSLDHHHRAVDDAECTAEIFLKMMDMLHDRGIDTMEELAAAGTSDENLIRKLPS
YHAIFLAQNDIGRVNLYRLVSDSHLHYFNKRPLVPKSELNRWREGILVGSACEAGELYQA
LVGGASDEDIARIVRFYDYLEIQPTGNNAFMILSDRYPVHSEKDIEDLNRRIVRLGKEFN
KLVAATCDVHFLDPEDEVYRRIIMAGKGFKDADSQAPLYLRTTEEMLAEFRYLGSDLAEE
VVITNTRKIADMIEKISPVRPDKCPPVIPDSDRTLREICYNRAHEIYGENLPDVVTERLE
RELNSIISNGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVATMAGITEVNPLSPHYL
CPKCHYVDFDSPEVKAYAGRAGCDMPDRVCPVCGERLDKLGFDIPFETFLGFKGNKEPDI
DLNFSGDYQSKAHKYTEVIFGDGQTFRAGTIGTLADKTAFGYVKNYYEERGVRKRNCEID
RIVQGCVNVRRTTGQHPGGIIVLPLGENIYSFTPIQHPANDMTTDIITTHFDYHSIDHNL
LKLDILGHDDPTMIRMLQDLTGLDPTAIPLDSKEVMSLFQNTSALGVTPDDLMGCPLGAL
GIPEFGTDFAMNMLIDAQPKQFSDLVRISGLSHGTDVWLGNAETLIKEGTATISTAICCR
DDIMIYLIGQGMDSELSFTIMEAVRKGKGLKPEWEEMMKAHDVPDWYIWSCKKIKYMFPK
AHAAAYVMMAWRIAYCKVFYPLAYYAAFFSIRATAFDYEKMCLGKDRVEYHINDLKNREK
TEKLSEKEKGTLRDLKIVQEMYARGFEFMPLDIYRAKAKHFQIIDGKLMASLSTIDGMGD
KAAVCVEEEAKKGPFLSRDDFRNRTKVSKTVTDLMDELGMLESLPESNQYSLFDL
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgttttctgatgtattttgtgaactgcagctgacagaagatatgcagaca
tttctgaaggatgtatcggtgtcccgggtgacaacaaaccgggaacatacccgtctgcgc
gtttatatggaaagcccgcatctgattgacaagatgcggatttttcagcttcaggatctt
atttcacggcagctgtttcacaaaaaaatggaagtaatcatcattgaaaaattccattta
tccgcccagtacaatctgaaattcctggttaacgcttactgggacagtattaagacggaa
atccgcaattacagcaaagtgctctatacagtgatccgcaaagcaaaactgacctttccg
gaagacggcgcgctggagctggaactggaggacacgattccggccagacagcaggagacg
gaactctgccggattctggaaaaaattttctgtgagcggtgcggactggatgccagactt
cacataacgtatcgggcacatgaggattcccgtacgctgcagaatgccgaaatacagctg
aaaaacaagatccatctgatttcgcagcgggtgcaggacagtcatgcggaggaacggccg
gacgccggccaggcaccgggcgctccggatacggagacagccaggaacgggaagaaggcg
gctccggattccggacatacggcaaacacccggccgtcagccggagcttttaagggaaag
cgtttctccggaaacggcgcgcgcagagccggatggaaccctatggaaacagacagcaaa
aacctggtgtacggaagagatttcgacggcgaggcagtggaaatgtctcaggtggatgag
agtatgggagacgtgattctccggggaaaaatcctttcgtttgaaatgcgggataccaga
aaaggggaacgtaaaatggtgatttttacaatcacggattttactgatacctttaccgtg
aagatgtttccgaaagtagagtgggcagatgaatttgccgcacgggtaaagaagggcggt
ttctataaattaaagggcgttgcgtccattgaccggttcgacggggaactgtcgatcagt
tcggtgaccggaatccgtaaaattcctgattttacagcaacccgtatggataccagcccc
gtcaagcgcgtggagctgcactgccacaccaaaatgagcgacatggacggcgtcagtgaa
gtgggtgacattattgcgcgggctgcttcctgggggcatccggccattgcggtaacggat
cacggggacgtacaggcgtttccggaagcaaaccatgccatggaacatgtgcccaaagat
ttcaaggtaatctatgggatggaagcgtatctggtggatgatctgaagggactggtgacg
aatcctgccggacagaattttcaggacccctttgtggtatttgacctggaaaccacagga
ctcagcgcaagcgcgtgccggatcatcgagatcggagccgtaaaagtggaacagggcagg
attacggaccggttttccacgtttgtcaatcctcaggaaccgattccctatcatattgaa
cagctgacatccatcaatgacgccatggtcatggatgcgcctgtaatccgccaggcactg
ccggaattcatggaattctgtgaagggtgcatgatggtggcccacaatgcggactttgat
atgggatttattcagagaaactgtgccgaacagggaatcccctgtgaaaaaaccatcctg
gatacagtgatgctggcccggtatctgctgccccagctgaaccggttcaagctggatacc
gtggccaaggcgctgaaagtgtccctggaccatcatcaccgcgccgtggatgacgcggaa
tgtaccgcggaaattttcctgaaaatgatggatatgctccatgaccggggcattgatacc
atggaagaactggcagctgccgggacgtcagatgaaaacctgatccgcaaactgccttct
tatcatgctatttttctggcacagaatgatattgggcgtgtaaatctgtaccggctggta
tcggattcccatctgcactatttcaacaagcggccccttgtgccgaaaagtgaactgaac
cgctggcgggagggaattttagtgggttctgcctgtgaggcaggcgaactgtaccaggcg
ctggtaggaggcgcttccgatgaggatatcgcgcggattgtgcggttttatgactatctg
gaaatccagcccaccggaaataatgcgttcatgatcctgtcagaccgatacccggtgcat
tcggaaaaagacattgaagacctgaaccgccggattgtacgcctggggaaggaatttaac
aaactggtggcagccacctgcgatgtgcatttcctggatcccgaggatgaagtctaccga
cggattattatggcaggcaagggattcaaagacgcggacagccaggcgcccctgtatctg
cgcaccacggaggaaatgctggcggaattccgttatctgggcagcgatctggcagaagag
gtagttattacaaacaccagaaaaatagcggacatgattgaaaagatatctccggtgcgt
ccggataaatgtccgccggtgatcccggattccgaccggacactgcgggagatctgctat
aaccgtgcacatgaaatctatggggaaaacctgccggacgtagtgacggaacgtctggag
cgggaattgaattccattatttccaacgggttcgcggttatgtatatcattgcgcagaaa
ctggtatggaagtccaacgaagacggatatctggtgggctcccgcggatcggtgggatca
tcctttgtagccacgatggcgggaatcaccgaggtgaatcccctgtccccccattatctg
tgcccgaaatgccactatgtggattttgactccccggaagtcaaagcctatgccggaaga
gcaggctgcgacatgccggacagggtctgcccggtgtgcggggagcgtctggataaactg
ggatttgatatcccgtttgagacttttctggggtttaaaggaaacaaggagccggatatc
gacctgaatttttccggcgactatcagagtaaagcgcataagtatacggaagtgattttc
ggtgacggtcagacctttcgggccggaaccatcggtaccctggcggacaaaaccgccttt
ggctatgtgaaaaattattacgaggagcggggcgtccgcaagcggaactgtgaaatcgac
cggattgtccagggatgcgtcaatgtgcggcgtacgaccgggcagcatccgggcggcatc
attgtgctgccgctgggggaaaacatctactcgtttacgccgatacagcatccggcaaac
gatatgaccacggatattatcacgacccattttgattaccattccatcgatcacaacctg
ctgaagctggatatcctcgggcatgatgatccgacgatgatccgtatgctgcaggatctg
acgggactggatcccacggcaatccctctggacagcaaagaggtcatgtccctgtttcag
aatacctcagccctgggcgttacgccggatgatctgatgggctgtccgctgggcgccctg
ggaatcccggaattcggaacagattttgcgatgaacatgctgatcgacgcgcagccaaag
cagttttccgatctggtgcggatctccggactttcccatggaacggatgtgtggctgggc
aatgcggaaacgctgatcaaagaaggaaccgccacaatttccacagcgatctgctgccgg
gatgatatcatgatctatctgatcggccagggaatggacagcgagctgtcttttacaatc
atggaagccgtccgcaagggaaagggcctgaagccggaatgggaagaaatgatgaaagcc
catgatgtaccggactggtatatctggtcctgcaaaaagatcaaatatatgttcccgaag
gctcacgcggctgcctatgtcatgatggcatggcggattgcctactgcaaagtgttttat
ccgctggcctactacgcggcctttttcagtatacgcgccactgcctttgactacgagaaa
atgtgtctcggcaaagaccgggtcgagtatcatatcaacgacctgaagaaccgtgaaaaa
acagaaaaactgtcggaaaaggaaaagggcaccctccgtgacctgaaaattgtgcaggag
atgtatgccagagggtttgaatttatgccgctggatatctatcgggcaaaggcaaagcat
tttcagatcattgacgggaagctgatggcttctttaagcaccattgacggcatgggagac
aaggcggcggtatgtgtggaggaagaagcgaaaaaaggccccttcctttcccgggatgat
ttccgcaaccgtacgaaagtcagcaagacagtaaccgatctgatggatgagctgggaatg
ctggaaagccttccggaatccaaccagtactcactgtttgatttgtga
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integrated database retrieval system