KEGG   Clostridium sp. SY8519: CXIVA_23460
Entry
CXIVA_23460       CDS       T01565                                 
Name
(GenBank) hypothetical protein
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
cls  Clostridium sp. SY8519
Pathway
cls03030  DNA replication
cls03430  Mismatch repair
cls03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cls00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CXIVA_23460
   03430 Mismatch repair
    CXIVA_23460
   03440 Homologous recombination
    CXIVA_23460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cls03032]
    CXIVA_23460
   03400 DNA repair and recombination proteins [BR:cls03400]
    CXIVA_23460
Enzymes [BR:cls01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CXIVA_23460
DNA replication proteins [BR:cls03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CXIVA_23460
DNA repair and recombination proteins [BR:cls03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CXIVA_23460
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NI HHH_6 Rv2179c-like tRNA_anti-codon RNase_H_2 DNA_pol_A_exo1 DEDDh_C DNA_pol3_a_NII
Other DBs
NCBI-ProteinID: BAK48313
UniProt: F7V6D4
LinkDB
Position
complement(2548535..2553022)
AA seq 1495 aa
MEKLFSDVFCELQLTEDMQTFLKDVSVSRVTTNREHTRLRVYMESPHLIDKMRIFQLQDL
ISRQLFHKKMEVIIIEKFHLSAQYNLKFLVNAYWDSIKTEIRNYSKVLYTVIRKAKLTFP
EDGALELELEDTIPARQQETELCRILEKIFCERCGLDARLHITYRAHEDSRTLQNAEIQL
KNKIHLISQRVQDSHAEERPDAGQAPGAPDTETARNGKKAAPDSGHTANTRPSAGAFKGK
RFSGNGARRAGWNPMETDSKNLVYGRDFDGEAVEMSQVDESMGDVILRGKILSFEMRDTR
KGERKMVIFTITDFTDTFTVKMFPKVEWADEFAARVKKGGFYKLKGVASIDRFDGELSIS
SVTGIRKIPDFTATRMDTSPVKRVELHCHTKMSDMDGVSEVGDIIARAASWGHPAIAVTD
HGDVQAFPEANHAMEHVPKDFKVIYGMEAYLVDDLKGLVTNPAGQNFQDPFVVFDLETTG
LSASACRIIEIGAVKVEQGRITDRFSTFVNPQEPIPYHIEQLTSINDAMVMDAPVIRQAL
PEFMEFCEGCMMVAHNADFDMGFIQRNCAEQGIPCEKTILDTVMLARYLLPQLNRFKLDT
VAKALKVSLDHHHRAVDDAECTAEIFLKMMDMLHDRGIDTMEELAAAGTSDENLIRKLPS
YHAIFLAQNDIGRVNLYRLVSDSHLHYFNKRPLVPKSELNRWREGILVGSACEAGELYQA
LVGGASDEDIARIVRFYDYLEIQPTGNNAFMILSDRYPVHSEKDIEDLNRRIVRLGKEFN
KLVAATCDVHFLDPEDEVYRRIIMAGKGFKDADSQAPLYLRTTEEMLAEFRYLGSDLAEE
VVITNTRKIADMIEKISPVRPDKCPPVIPDSDRTLREICYNRAHEIYGENLPDVVTERLE
RELNSIISNGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVATMAGITEVNPLSPHYL
CPKCHYVDFDSPEVKAYAGRAGCDMPDRVCPVCGERLDKLGFDIPFETFLGFKGNKEPDI
DLNFSGDYQSKAHKYTEVIFGDGQTFRAGTIGTLADKTAFGYVKNYYEERGVRKRNCEID
RIVQGCVNVRRTTGQHPGGIIVLPLGENIYSFTPIQHPANDMTTDIITTHFDYHSIDHNL
LKLDILGHDDPTMIRMLQDLTGLDPTAIPLDSKEVMSLFQNTSALGVTPDDLMGCPLGAL
GIPEFGTDFAMNMLIDAQPKQFSDLVRISGLSHGTDVWLGNAETLIKEGTATISTAICCR
DDIMIYLIGQGMDSELSFTIMEAVRKGKGLKPEWEEMMKAHDVPDWYIWSCKKIKYMFPK
AHAAAYVMMAWRIAYCKVFYPLAYYAAFFSIRATAFDYEKMCLGKDRVEYHINDLKNREK
TEKLSEKEKGTLRDLKIVQEMYARGFEFMPLDIYRAKAKHFQIIDGKLMASLSTIDGMGD
KAAVCVEEEAKKGPFLSRDDFRNRTKVSKTVTDLMDELGMLESLPESNQYSLFDL
NT seq 4488 nt   +upstreamnt  +downstreamnt
atggaaaaactgttttctgatgtattttgtgaactgcagctgacagaagatatgcagaca
tttctgaaggatgtatcggtgtcccgggtgacaacaaaccgggaacatacccgtctgcgc
gtttatatggaaagcccgcatctgattgacaagatgcggatttttcagcttcaggatctt
atttcacggcagctgtttcacaaaaaaatggaagtaatcatcattgaaaaattccattta
tccgcccagtacaatctgaaattcctggttaacgcttactgggacagtattaagacggaa
atccgcaattacagcaaagtgctctatacagtgatccgcaaagcaaaactgacctttccg
gaagacggcgcgctggagctggaactggaggacacgattccggccagacagcaggagacg
gaactctgccggattctggaaaaaattttctgtgagcggtgcggactggatgccagactt
cacataacgtatcgggcacatgaggattcccgtacgctgcagaatgccgaaatacagctg
aaaaacaagatccatctgatttcgcagcgggtgcaggacagtcatgcggaggaacggccg
gacgccggccaggcaccgggcgctccggatacggagacagccaggaacgggaagaaggcg
gctccggattccggacatacggcaaacacccggccgtcagccggagcttttaagggaaag
cgtttctccggaaacggcgcgcgcagagccggatggaaccctatggaaacagacagcaaa
aacctggtgtacggaagagatttcgacggcgaggcagtggaaatgtctcaggtggatgag
agtatgggagacgtgattctccggggaaaaatcctttcgtttgaaatgcgggataccaga
aaaggggaacgtaaaatggtgatttttacaatcacggattttactgatacctttaccgtg
aagatgtttccgaaagtagagtgggcagatgaatttgccgcacgggtaaagaagggcggt
ttctataaattaaagggcgttgcgtccattgaccggttcgacggggaactgtcgatcagt
tcggtgaccggaatccgtaaaattcctgattttacagcaacccgtatggataccagcccc
gtcaagcgcgtggagctgcactgccacaccaaaatgagcgacatggacggcgtcagtgaa
gtgggtgacattattgcgcgggctgcttcctgggggcatccggccattgcggtaacggat
cacggggacgtacaggcgtttccggaagcaaaccatgccatggaacatgtgcccaaagat
ttcaaggtaatctatgggatggaagcgtatctggtggatgatctgaagggactggtgacg
aatcctgccggacagaattttcaggacccctttgtggtatttgacctggaaaccacagga
ctcagcgcaagcgcgtgccggatcatcgagatcggagccgtaaaagtggaacagggcagg
attacggaccggttttccacgtttgtcaatcctcaggaaccgattccctatcatattgaa
cagctgacatccatcaatgacgccatggtcatggatgcgcctgtaatccgccaggcactg
ccggaattcatggaattctgtgaagggtgcatgatggtggcccacaatgcggactttgat
atgggatttattcagagaaactgtgccgaacagggaatcccctgtgaaaaaaccatcctg
gatacagtgatgctggcccggtatctgctgccccagctgaaccggttcaagctggatacc
gtggccaaggcgctgaaagtgtccctggaccatcatcaccgcgccgtggatgacgcggaa
tgtaccgcggaaattttcctgaaaatgatggatatgctccatgaccggggcattgatacc
atggaagaactggcagctgccgggacgtcagatgaaaacctgatccgcaaactgccttct
tatcatgctatttttctggcacagaatgatattgggcgtgtaaatctgtaccggctggta
tcggattcccatctgcactatttcaacaagcggccccttgtgccgaaaagtgaactgaac
cgctggcgggagggaattttagtgggttctgcctgtgaggcaggcgaactgtaccaggcg
ctggtaggaggcgcttccgatgaggatatcgcgcggattgtgcggttttatgactatctg
gaaatccagcccaccggaaataatgcgttcatgatcctgtcagaccgatacccggtgcat
tcggaaaaagacattgaagacctgaaccgccggattgtacgcctggggaaggaatttaac
aaactggtggcagccacctgcgatgtgcatttcctggatcccgaggatgaagtctaccga
cggattattatggcaggcaagggattcaaagacgcggacagccaggcgcccctgtatctg
cgcaccacggaggaaatgctggcggaattccgttatctgggcagcgatctggcagaagag
gtagttattacaaacaccagaaaaatagcggacatgattgaaaagatatctccggtgcgt
ccggataaatgtccgccggtgatcccggattccgaccggacactgcgggagatctgctat
aaccgtgcacatgaaatctatggggaaaacctgccggacgtagtgacggaacgtctggag
cgggaattgaattccattatttccaacgggttcgcggttatgtatatcattgcgcagaaa
ctggtatggaagtccaacgaagacggatatctggtgggctcccgcggatcggtgggatca
tcctttgtagccacgatggcgggaatcaccgaggtgaatcccctgtccccccattatctg
tgcccgaaatgccactatgtggattttgactccccggaagtcaaagcctatgccggaaga
gcaggctgcgacatgccggacagggtctgcccggtgtgcggggagcgtctggataaactg
ggatttgatatcccgtttgagacttttctggggtttaaaggaaacaaggagccggatatc
gacctgaatttttccggcgactatcagagtaaagcgcataagtatacggaagtgattttc
ggtgacggtcagacctttcgggccggaaccatcggtaccctggcggacaaaaccgccttt
ggctatgtgaaaaattattacgaggagcggggcgtccgcaagcggaactgtgaaatcgac
cggattgtccagggatgcgtcaatgtgcggcgtacgaccgggcagcatccgggcggcatc
attgtgctgccgctgggggaaaacatctactcgtttacgccgatacagcatccggcaaac
gatatgaccacggatattatcacgacccattttgattaccattccatcgatcacaacctg
ctgaagctggatatcctcgggcatgatgatccgacgatgatccgtatgctgcaggatctg
acgggactggatcccacggcaatccctctggacagcaaagaggtcatgtccctgtttcag
aatacctcagccctgggcgttacgccggatgatctgatgggctgtccgctgggcgccctg
ggaatcccggaattcggaacagattttgcgatgaacatgctgatcgacgcgcagccaaag
cagttttccgatctggtgcggatctccggactttcccatggaacggatgtgtggctgggc
aatgcggaaacgctgatcaaagaaggaaccgccacaatttccacagcgatctgctgccgg
gatgatatcatgatctatctgatcggccagggaatggacagcgagctgtcttttacaatc
atggaagccgtccgcaagggaaagggcctgaagccggaatgggaagaaatgatgaaagcc
catgatgtaccggactggtatatctggtcctgcaaaaagatcaaatatatgttcccgaag
gctcacgcggctgcctatgtcatgatggcatggcggattgcctactgcaaagtgttttat
ccgctggcctactacgcggcctttttcagtatacgcgccactgcctttgactacgagaaa
atgtgtctcggcaaagaccgggtcgagtatcatatcaacgacctgaagaaccgtgaaaaa
acagaaaaactgtcggaaaaggaaaagggcaccctccgtgacctgaaaattgtgcaggag
atgtatgccagagggtttgaatttatgccgctggatatctatcgggcaaaggcaaagcat
tttcagatcattgacgggaagctgatggcttctttaagcaccattgacggcatgggagac
aaggcggcggtatgtgtggaggaagaagcgaaaaaaggccccttcctttcccgggatgat
ttccgcaaccgtacgaaagtcagcaagacagtaaccgatctgatggatgagctgggaatg
ctggaaagccttccggaatccaaccagtactcactgtttgatttgtga

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