Clostridium sp. SY8519: CXIVA_24500
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Entry
CXIVA_24500 CDS
T01565
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cls
Clostridium sp. SY8519
Pathway
cls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CXIVA_24500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cls03019
]
CXIVA_24500
Messenger RNA biogenesis [BR:
cls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CXIVA_24500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAK48417
UniProt:
F7V6N8
LinkDB
All DBs
Position
complement(2662842..2664404)
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AA seq
520 aa
AA seq
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MASNPIIVTIIAVAIAAVAAFFIAYAAAKSKMEKDAAAKIGSAEDRARAIIDEAVKTAEG
KKREALLEAKEESIRSKNELDREIKDRRQEVSRAERRVEQKEANLDKKIDAQERREKDFA
VREEKLKATQAEVAKLNEQRIQELERISGLTSEQAKEYLLKSVEEDVKLDTAKMIKELES
QAKEEAGRKAKEYVVNAIQKCAADHASEATISVVELPNDEMKGRIIGREGRNIRTLETMT
GIDLIVDDTPEAVILSGFDPIRREVARVALEKLIVDGRIHPARIEEMVEKAQKEVETMIR
EEGESAALEVGVHGIHPELIRLLGRMKFRTSYGQNALKHSIEVAQITGLLAGEIGEDVRI
AKRAGLLHDIGKSVDHEMEGSHIQIGVDLCRKFKESPIVINAVASHHGDTEPESLIACLV
QAADAISAARPGARRETIDTYSNRLQKLEDITNSFKGVEKSFAVQAGREIRVMVVPDQIS
DADMVLLARDISKQIEAELEYPGQIKVNVIRESRVVDYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtggccagtaatccgattatcgtcacaataatcgcagtagcaattgcagccgtagcagca
ttcttcatcgcgtatgcagctgccaaatccaagatggaaaaggacgcggcagccaagatc
ggaagtgcggaagaccgtgcccgcgccattattgacgaagctgtcaaaacagcggaaggc
aaaaaacgcgaggcgctgctggaggcgaaggaggaatcgatcaggtcgaaaaacgaactt
gaccgtgaaatcaaggaccgccggcaggaggtatcccgtgcagaacgccgcgtcgagcag
aaagaagccaatttggacaaaaagattgacgcgcaggaacggcgggaaaaagattttgca
gtacgtgaggagaagctgaaagctacccaggcggaagttgccaaactgaatgagcagcgc
atacaggaactggaacgaatctccggattaacctccgaacaggcaaaagagtatctgtta
aaaagcgtagaagaagatgtaaagcttgacacagctaagatgattaaagagctggaaagt
caggcaaaggaagaagccggaaggaaagccaaggaatacgtggttaatgccattcagaag
tgtgcggcggaccacgcgtccgaagcgacgatttctgtcgtggaacttccgaacgatgag
atgaaagggcgtattatcgggcgggaaggacggaatatccgcacgcttgagacgatgaca
ggcatcgacctgattgtggacgatacgccggaagccgtgatcttatccggctttgatcct
atcagaagagaagtggcgcgcgttgcccttgaaaaactgatcgtagacggacggattcat
ccggcccgcatcgaggaaatggtggaaaaggcacagaaagaagtagagaccatgatccgt
gaggaaggagaatctgctgctttggaagttggcgtgcatggcatccacccggaactgatc
cggcttttgggccgcatgaagttccgtacaagctacggacagaatgcgctgaagcattcc
atcgaagttgctcagatcaccggtcttttagccggcgaaatcggcgaagatgtgcgcatt
gcaaaacgtgcgggactgcttcatgacatcggcaaatccgtggaccacgagatggaggga
tcccacatccagattggtgtggacctctgccggaagtttaaggaatccccgattgtgatc
aatgcagtcgcatcccatcatggggataccgaaccggaatccctgattgcgtgtctggtg
caggctgcagatgcaatttctgctgcacggccgggtgcccgcagagaaactattgataca
tattctaatcgcttacagaaactcgaagacatcacgaatagtttcaaaggtgtcgaaaaa
tcttttgctgttcaggcaggcagagaaatccgcgtgatggtcgttccagaccagatcagt
gatgctgacatggtacttcttgcccgtgatatttccaagcagattgaagctgaactggaa
tatccgggacagattaaagtaaatgtgatccgtgaaagcagagtggtcgattatgcgaag
taa
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