Clostridium bornimense: CM240_0079
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Entry
CM240_0079 CDS
T03165
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
clt
Clostridium bornimense
Pathway
clt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CM240_0079 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_0079 (exoA)
Enzymes [BR:
clt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CM240_0079 (exoA)
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CM240_0079 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
NPC1_MLD
Motif
Other DBs
NCBI-ProteinID:
CDM67258
UniProt:
W6RSN4
LinkDB
All DBs
Position
rep1:complement(75886..76641)
Genome browser
AA seq
251 aa
AA seq
DB search
MKKLISWNVNGLRACVKKGFLDYFKDVDADIFCIQESKLQEGQIDLNLEGYYDYWNYAEK
KGYSGTAIFTKEKPLNVTLGLGIEEHDKEGRVITLEFEDFYMITVYTPNSQDKLARINYR
MSWEDAFLNYIKELEKNKPVIVCGDLNVAHEEIDLKNPKTNRNNAGFSDQEREKFSTLLS
NGFIDTFRYFYPDKEGAYSWWSYRFNARANNAGWRIDYFLTSNSLKDRLVSADIHNEIFG
SDHCPVELVIK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaatttcatggaatgtaaatggcctcagagcttgtgtaaaaaaagggttc
ttagactattttaaagatgttgatgctgatatattttgtattcaagaaagtaagctacaa
gaaggtcaaatagatttaaatcttgagggttactatgattattggaactatgctgaaaag
aaaggttattctggtacagctatatttactaaagaaaaacctcttaatgttaccttaggt
cttggtattgaagaacatgataaagaaggtagagttataacattagaatttgaagatttc
tatatgataactgtttatacaccaaactcacaagataaattagcaagaataaattataga
atgtcatgggaagatgcatttctaaattacattaaagaacttgaaaaaaataaacctgta
atagtttgtggtgacttaaatgtagctcatgaagaaattgatttaaaaaatccaaagact
aataggaataatgctggttttagtgatcaggagagagaaaaattttccacccttttatct
aacggatttattgatacctttagatatttttatccagataaagaaggtgcctattcttgg
tggtcttatagatttaatgctagagctaataatgcaggatggagaatcgactatttctta
acttcaaactctttaaaagatcgacttgtcagtgctgatatccataacgaaatttttggt
tctgatcactgtcctgtagaattagtaattaaataa
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