Clostridium bornimense: CM240_0458
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Entry
CM240_0458 CDS
T03165
Name
(GenBank) DNA mismatch repair protein MutS domain-containing protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
clt
Clostridium bornimense
Pathway
clt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CM240_0458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_0458
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CM240_0458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
T2SSE
AAA_22
Bin3
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CDM67623
UniProt:
W6RTK3
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Position
rep1:482888..484774
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AA seq
628 aa
AA seq
DB search
MNNDTMEKLNYNKLKEMVKSYCSSSLGRNLIDKLQPSSSIKEVQRRLSETTEGRCLLDAD
YYIPLEGISNVTVLIDKIDKNGVLDPSELISISDFLRGCRKIKGFMKNKEGYAPTLSAYG
ENISELCEVEENINNAIKGSGIDTNASKELKKIRKQIDICEGRIDERLNKFLRNPNNKEY
IQDFFISKRNDKYTIPIKAQYKNYVKGVLVDTSAKGGTVFIEPEAISKYTSELAMLKAEE
SIEEYRILSILTEEIYNYIKEIKINVEVIAEYDMIFAKAKYSKAIDGIMPKVNDCGYTKI
NKGRYPFIENSVPLDYEIGKDYRTLIITGPNAGGKTVVLKTIGVLTLATESGFHIAADDG
TEISIFDNIFVDIGDNQSVENSLSTFSSHVKNLADILKRTNNSTLLLFDEIGSGTEPNEG
AALAIAMLEEFYYKGAITIASTHYGEIKNFSREHPDFENAAMDFEKETLEPLYKLSIGKS
GNSNALYISKKMGIPDFIIEKTKCYIENKEYSYNLIKESKKKTIIEKIKEESINHYNVGD
KVLLLDKGESAIVYKGMDRFNNITVLYKKEFLEVNYKRVKLEIKREDLYPEDYDMEQLFV
DFKTRKIKKDIERGSKKALNEIKKGHMK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgatacaatggaaaaattaaattataataaattaaaagaaatggttaagagt
tattgttctagtagtttaggtagaaatctaattgataaattacaaccaagtagtagtata
aaagaagtacagcgaagattaagtgagacaacggaaggaagatgtcttttagatgcagat
tactatataccattagaaggaatatcaaatgtcactgttcttattgataaaattgataaa
aatggagttttggatccatcagagttaattagtatatcggattttttaagaggatgtaga
aaaattaagggttttatgaagaataaagaaggatatgctcctacattaagtgcttatggt
gaaaatatatcagagctatgtgaggttgaagaaaatatcaataatgctataaagggcagt
ggtatagatacaaatgcatctaaggagttaaaaaagataagaaaacagatagatatttgt
gaaggaagaattgatgagaggttaaataagtttttaagaaatcctaataataaggagtat
atacaagattttttcataagtaagagaaatgataaatatactattccaataaaagcgcaa
tataaaaattatgttaaaggagttttagtagatacttcagctaagggaggtactgtcttt
atagaaccagaagcaatctcaaaatatacttcagaattagctatgttgaaggcggaagaa
agtattgaagaatacaggattttatcaatactgacagaagaaatatataattatataaaa
gaaataaaaattaatgtagaagttatagcagaatatgatatgatctttgctaaagcaaag
tatagtaaagctatagatggaattatgccaaaagttaatgattgcggttatactaaaatt
aataaaggaaggtatccttttatagaaaattcagtacctttggattatgaaataggaaaa
gattataggacattaataataacaggcccaaatgctggggggaagactgttgtattaaaa
actataggggtattgacattagctacggaatcaggattccatattgcagcagatgatggg
acagagataagtatttttgataatatctttgttgatataggtgataatcaaagtgttgaa
aattctctaagtactttttcatctcatgtaaaaaatttagctgatattttaaaaagaact
aataattctacattgttgctatttgatgagataggaagtggtacagaaccaaatgaggga
gctgcattagctattgctatgttagaagagttttattataaaggtgcaattactatagca
tctactcattatggtgagataaagaatttttcaagagagcatccggattttgaaaatgct
gctatggattttgaaaaagagacattagaaccactatataagttaagtattggaaagtca
ggtaatagtaatgctctttatatatctaaaaagatgggaataccggattttataattgaa
aaaacaaaatgttatattgaaaataaagaatatagttataacttgataaaagaaagtaaa
aagaagactattatagaaaagattaaagaggaaagtattaatcattataacgttggtgat
aaggtattgttattggataaaggtgaatcagctatagtatacaagggaatggatagattt
aacaatataactgttttatataaaaaagagtttttagaagtgaattataaaagagtaaag
ttagaaataaagagggaagatttatatcctgaagattatgatatggaacaattatttgta
gactttaaaactagaaagataaagaaagatattgaaagagggtcaaaaaaagctttaaat
gagataaaaaagggtcatatgaaataa
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