Clostridium bornimense: CM240_0792
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Entry
CM240_0792 CDS
T03165
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
clt
Clostridium bornimense
Pathway
clt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CM240_0792 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clt03019
]
CM240_0792 (recQ)
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_0792 (recQ)
Enzymes [BR:
clt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CM240_0792 (recQ)
Messenger RNA biogenesis [BR:
clt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CM240_0792 (recQ)
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CM240_0792 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HHH
Helicase_Sgs1
GeBP-like_DBD
TnsD
Motif
Other DBs
NCBI-ProteinID:
CDM67957
UniProt:
W6S0Z7
LinkDB
All DBs
Position
rep1:883240..885648
Genome browser
AA seq
802 aa
AA seq
DB search
MNKFEILEKYYGYREFRKGQEEVIDSILQGKDVLAIMPTGGGKSICYQVPALILNGLTIV
ISPLISLMKDQVDTIKEIGIEAAYINSSLSSREFNEIIEGIREDKYKIIYIAPERLESYE
FFAIIAEKDISQIAIDEAHCVSQWGHDFRSSYRRIGSFIDRLYKRPIITAFTATASEEVR
QDIVNLLKLNSPKIFITGFDRENLSIDIIKGGNKKEYILKYIEKNRNQCGIIYASTRKEV
DNLYEMLQNKGYSVGRYHAGLGDEERRSNQEDFIYDRVSLMIATNAFGMGIDKPNIRYVI
HYSIPKNIEGYYQEIGRAGRDGEKSQCILLFSPSDIHTQKYLIDVGIENEERKVIQYKKL
QQMIDLIYSNDCYRKGILNYFGEEYNKECGNCSNCLSEGEIVDKTIDAQKVLSCIYRMKR
GFGTKMIVDVLRGSKNKRVLDLGFDKLSTYGIMKDYTGEKLKEFINTLVSHGFIDLIEGD
YPVVRLNDKSILVLKGKEEVRFKEYVVDKKIIEDNELVMILKELRLEIAREEGVPPYIIF
GDITLREMSSVYPRTKEEFLAISGIGEKKYDKYGERFSEVIKRYVEDNNINIIVNNEDDE
IIEVSTDKELLNRLLEVRKSFALKENTLDRSIISIQSLKEISGRYPITVDEFKDISGVGP
KKVKEYGEFFVEAVKSYVEEKNIKRNWIEKKHRKVIIDGDGRNNEEKSIDMVKEGIYLKD
ISEEIEVSISTILGYITDYIKEYGENPLKEDISNLYTEDEERLIINELKSTSSNKISELK
KKLPDYIKYESIRAVIIKNNYI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaatttgagatattagaaaagtattatgggtatagagaatttagaaaagggcaa
gaggaagtaatagattcaattttacaagggaaagatgtattagcaattatgcctactggg
ggaggaaaatctatttgttatcaagttccagcacttattcttaatggattaacaatagtg
atttctccacttatttctcttatgaaagatcaagtagatactattaaggaaattggaatt
gaagcggcatatataaattcatcattgtcttctagagaatttaatgaaataattgaagga
ataagagaagataaatataaaataatatatatagcaccagaaaggttagaatcatatgaa
ttttttgcaataattgcagagaaagatatctcgcaaatagcaattgatgaggcacattgt
gtatcgcaatggggacatgattttaggtcaagttataggagaattgggagttttatagat
aggctttataagagacctataataacagcttttactgctaccgcatctgaagaagtacga
caagatatagtaaatttactgaaacttaatagtccgaagatttttataacaggttttgat
cgagaaaatttaagtatagacataataaaaggtggtaacaaaaaagaatacatattaaaa
tatatagagaaaaatagaaaccaatgtggaataatatatgcatctacaagaaaagaagta
gataatttatatgaaatgttacaaaataaaggatattctgtaggaagatatcatgcagga
ttaggtgatgaagaaagacggagtaatcaagaagattttatatatgatagagtaagctta
atgattgctactaacgcttttggtatgggaattgacaagcctaatataagatatgtaata
cattatagcattcctaaaaatattgaaggatattatcaagagattggtagagcaggaaga
gatggtgaaaagagtcaatgtatattgttattctctccatcagatatacatacacaaaag
tatcttattgatgtaggaatagaaaatgaagaaagaaaagtaattcaatataagaagttg
caacagatgatagaccttatttatagcaatgattgttatagaaaaggaatattgaattat
tttggtgaagaatacaataaggaatgcggtaattgtagtaattgtttaagcgaaggagaa
attgttgataaaactattgatgctcaaaaagtattatcttgtatatataggatgaaaaga
ggctttggaaccaagatgattgtagatgttcttagaggttctaagaataaaagagtatta
gatttaggatttgataagttatctacttatggaattatgaaagattatactggagaaaaa
ctaaaagaatttataaatacattagtatctcatggatttatagatcttatagaaggggat
tatcctgtagtaagattaaacgataagtctatccttgtattaaaaggaaaagaggaagta
agatttaaggaatacgttgttgataagaagattattgaagataatgaattagtgatgata
cttaaagaattaagattagaaatagctagagaagagggagtacctccatatattatattt
ggagatattactcttagagaaatgagcagcgtatatccaagaactaaagaagaattcctt
gctatatctggtataggtgaaaagaaatatgataaatatggtgagagattttcagaagtt
ataaagagatatgtagaagataataatataaatattatagtaaataatgaagatgatgag
ataattgaggttagtactgataaagaattattaaatagattattagaagttagaaaaagc
tttgctttaaaagaaaatactttagatagaagtataatcagtatacaaagtttgaaagaa
attagcggaagatacccaataaccgttgatgaatttaaagatatttctggagtaggacct
aaaaaggttaaagaatatggagaattttttgtagaagcagttaaatcttatgttgaagaa
aaaaatattaagagaaattggattgaaaagaagcatagaaaagttattatagacggtgat
ggtagaaataatgaagagaaatctatagatatggtgaaagaaggaatatatttaaaagat
atttccgaggaaatagaagtatcaatttctacaattttagggtacattactgattatatt
aaagagtatggtgaaaatccattaaaagaagatataagtaatttatatacagaagatgaa
gagaggttaatcatcaatgaattaaaaagtacgtcatctaataagataagtgaattgaaa
aagaagttaccggattatattaaatatgaatctataagagcagtaataataaaaaataac
tatatataa
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