Clostridium bornimense: CM240_0838
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Entry
CM240_0838 CDS
T03165
Name
(GenBank) UvrD/REP helicase
Organism
clt
Clostridium bornimense
Pathway
clt03420
Nucleotide excision repair
clt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CM240_0838
03430 Mismatch repair
CM240_0838
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Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
AAA_22
ResIII
AAA_30
PhoH
DUF2358
DEAD
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CDM68002
UniProt:
W6S142
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Position
rep1:937892..939040
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AA seq
382 aa
AA seq
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MYNHKGKNKHINNIINIKRDSGVGFMRLNIEQQKLVNSKNVGHQVIRGIAGSGKTTVGVC
RASYLLDNVCDKDDMILFLTYNNSLKTYIKYLYKKTKDELKENQNISFFDNNSDKNIKVS
TIDSIMYGYFKAYCNENGKDLILEMQIKPAIMKQGIYNVRKTFGESSILNENNIKFLRDE
IAWIKACRYITLEKYQNCFRTGRSIGNNDGPSRLNRNSKSREAIFRLMEEVDKLLMKENK
VDIFTANIIALDQIQRYKNHKRYKHIIIDEAQDLTKVQLDFINILRSDKEDSSILFLADV
AQSIYPQAWLVKERSFKTIGYDMTGKGSRLSKNYRTTTEIAEAAYSLLSKDINIVEDENF
VKPSLLDKRGEYPIYTHFNNEE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtataatcacaaaggaaaaaataagcatattaataatataattaatattaagagagat
tcaggggttggttttatgagattaaatatagaacagcaaaaattggtaaatagcaaaaat
gtaggacatcaagttatacgtggaattgctggatcaggtaagacaacagtaggtgtatgt
agagcatcatatcttcttgataacgtttgcgataaagatgatatgattttatttcttacg
tataataattcattaaaaacatacataaagtatttgtacaaaaaaactaaagatgaactt
aaggaaaatcagaatataagtttttttgataataatagtgataagaacataaaggtatct
accatagattctattatgtatggatattttaaagcatattgtaatgaaaacggtaaagat
ttgattttggaaatgcaaataaagccggctattatgaagcaagggatttataatgtaaga
aaaacttttggagaatcatctatattaaatgaaaataatattaagtttttaagagatgaa
attgcttggattaaggcatgtaggtatattacgttggaaaaatatcaaaattgctttaga
actggaagatcaataggtaataatgatggacctagtagattgaatagaaattctaaaagt
agggaagcaatttttagacttatggaagaagttgataaattgcttatgaaagaaaataag
gtagatatatttacagctaatattattgcactagatcagatacaaaggtataaaaatcat
aaaagatataagcatattataattgatgaagctcaagatttaacaaaggtacagcttgat
tttataaatatattaagaagtgataaggaagatagttctatattatttttagctgatgta
gctcaaagtatatatccacaagcatggttagtaaaagaaagatcttttaaaactatagga
tatgatatgacggggaaagggtctaggttatctaaaaattatagaactactacagagata
gcagaggctgcatatagtcttttatcaaaagatattaatatagttgaagatgaaaacttt
gtaaaaccatcattattagataagaggggagaatatcctatatatactcattttaataat
gaagaataa
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