Clostridium bornimense: CM240_0842
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Entry
CM240_0842 CDS
T03165
Name
(GenBank) type II restriction endonuclease
KO
K03573
DNA mismatch repair protein MutH
Organism
clt
Clostridium bornimense
Pathway
clt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CM240_0842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_0842
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Strand discrimination factor
CM240_0842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutH
Motif
Other DBs
NCBI-ProteinID:
CDM68006
UniProt:
W6RTS7
LinkDB
All DBs
Position
rep1:complement(943054..944529)
Genome browser
AA seq
491 aa
AA seq
DB search
MYLPYNETDAKSIENYAQNLIGKSFSEILGEYNNNLNRIYEDTSNYGSTHENKKRKGGLG
ELIEECFFQYKCNNDSNPDFDKAGVELKVTPYKINKNKSLSAKERLILTMIDYCEVINED
FYESHLWKKSNLILLVYYLYSKEIPNRLDYRINYAKLFTPPKQDLEIIKNDYNIIVNKIR
NGKAHELSEGDTMYLGAATKAATSANSRKQPFSDIPAKPRAFSFKVSYMTHILNTYIVPN
KTTYEPIIKNVDELKNKTFEEYIINKINIHIGKSDKELCELFNREYNNNKSQWCDLSYRM
LGIKSNKAEEFIKANVVVKAIRIENNNSIKESMSFPAFKFKDIINEEWEESSLFNYFDKT
KFLFVVFKKNNDIYELKGCQFWNMPYNDLNTIVFDGWNKVRETIINGVILTIKETKSKKI
VLNNFPKKEDNPIVHIRPHTQRSAYLFNDGVIIGDIHKDANELPDGRYMTTQSFWINNTY
ILSQLNKSLLK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaccatataatgaaactgatgccaaaagtattgaaaattatgcgcaaaatctt
attggaaaaagcttttctgagattttaggtgaatataataataatctaaaccgtatatat
gaagatactagtaattatggttcaactcatgaaaataagaaacgaaaaggtggattaggt
gaattaatagaagaatgcttttttcaatataaatgcaataatgattcaaatcctgatttt
gataaagctggtgttgagttaaaagtaacaccatataaaattaataaaaataaaagtctt
tctgcaaaagaacgtttaattttaactatgattgactattgtgaagttattaatgaagat
ttttatgaaagccatctttggaaaaaatcaaatcttattctgctagtatattatttatac
tcaaaagaaatacctaataggttagattacagaatcaactatgctaagctatttacccca
cctaaacaggatttagaaataattaaaaatgattataatataatagttaacaagattaga
aatggaaaagctcatgaactctctgaaggagatacaatgtatcttggagcagcaacaaaa
gcagctacgtcagcaaatagtaggaaacaacctttttctgatattccagcaaagccaagg
gcattttcatttaaagtttcttatatgacacatattttaaatacgtatattgttccaaac
aaaacaacatatgaaccaataattaaaaatgttgatgaattaaaaaataaaacttttgaa
gaatatataattaataaaataaatattcatattggaaaatctgataaagaattatgtgaa
ttattcaatagggaatataataataataaatctcaatggtgtgatctttcatacagaatg
ttaggaataaaatcaaataaagcagaagaatttataaaagcaaatgttgttgttaaagct
attcgcatagaaaataacaactctataaaagaaagtatgtcttttccggcattcaaattt
aaagatataattaatgaagagtgggaagaatcttctttatttaattattttgataagaca
aaatttttatttgtagtatttaaaaagaataatgatatatacgagttaaaaggctgtcaa
ttctggaacatgccttataacgacctaaataccattgtttttgatggctggaataaagtt
cgtgaaactataatcaacggagttatacttactataaaggaaactaaatcaaaaaaaata
gtacttaataattttcctaaaaaagaggacaatcctattgttcatataagaccacacact
caaagaagcgcctatctctttaatgatggagttattattggtgatatccataaagatgca
aacgaacttcctgatggtagatatatgacaacacaaagtttctggataaataatacatat
attctaagtcaattaaataaatcacttttaaaataa
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