Clostridium bornimense: CM240_0870
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Entry
CM240_0870 CDS
T03165
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
clt
Clostridium bornimense
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_0870
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CM240_0870
Archaeal homologous recombinant proteins
CM240_0870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
PADR1_N
Motif
Other DBs
NCBI-ProteinID:
CDM68034
UniProt:
W6RWM5
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All DBs
Position
rep1:970846..972069
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AA seq
407 aa
AA seq
DB search
MRILHTGDWHLGKNLEGQSRMDEQERFLEDFIDIVKDNNIDLVIIAGDIYDSSNPPARAE
KMFYDTLKKLSLGGERMTLVISGNHDNPDRLVAAGPLAREHGIVMVGTPKSVVPIGIYGK
NEVVDSGEGFIEISINGENAVILTVPYPSEKRLNEVLYSTMDDEEEKMKSYSERIFSLFD
GLKKHYRKDTINLVTTHLFAMGSEEGGSERSIQLGGSYIVDGSCFPKEAQYIALGHVHKP
QIVPGTERRARYSGSPIHYNKKEINFTKKCFVIDAKVGEPCDITDIELKVYKPIEVWKCN
GVEEAINKCEENKDRECWVYLEIATDRYIREDEIKMMKDIKSDILEIMPKISSIDGEEDD
VENFKEKSFEEIFRDFYFKEREVEPSDEVVGTLLSIISEEDEADETN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcttacatacaggagattggcatctaggaaaaaaccttgaaggtcaaagtaga
atggatgaacaagaaagatttttagaagattttatagatatagtaaaagataataatata
gatttagtaataattgctggagatatttatgatagcagtaatccaccggcaagagctgaa
aaaatgttttatgacacattaaaaaaattatcattaggtggagaaagaatgactttagtt
atttcaggtaatcatgataatccagatagattggttgcagcaggacctttagctagagaa
catggtattgttatggttggaactcctaaatctgttgtacctattggtatatatggaaaa
aatgaagttgttgattctggagaagggtttattgaaataagtattaatggagaaaatgca
gtgatacttacagtaccttatccaagcgaaaagagattaaatgaagttttatatagtact
atggatgacgaagaagaaaaaatgaagtcttatagtgagagaattttctctttatttgat
ggattaaagaaacattatagaaaagatacaataaatcttgtaacaacacatctttttgca
atgggtagtgaagaaggtggatctgaaagaagtatacaattaggtggcagctatattgtt
gatggtagttgttttcctaaggaggcacaatatattgctttaggacatgttcacaagcca
caaatagtaccaggaacagaaagaagagctagatattccggatcaccgattcattataat
aagaaggaaattaatttcactaaaaaatgttttgttatcgatgctaaggtaggagaacca
tgtgatattactgatatagaacttaaagtttataaacctatagaagtatggaaatgtaat
ggtgtagaggaagcaattaataaatgtgaagagaataaagatagagaatgttgggtttat
ttagaaatagctactgacagatatattagagaagatgaaataaagatgatgaaagacatc
aaaagcgatattttagagataatgccaaagatatcgtctattgatggtgaagaggatgat
gttgaaaattttaaggagaaatcttttgaggagatatttagagatttttattttaaagag
agggaagttgaacctagtgatgaggtagtaggtacactattatcaataatatcggaggag
gatgaagcggatgagaccaattaa
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