Clostridium bornimense: CM240_1001
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Entry
CM240_1001 CDS
T03165
Symbol
ytjP
Name
(GenBank) putative dipeptidase YtjP
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
clt
Clostridium bornimense
Pathway
clt00300
Lysine biosynthesis
clt01100
Metabolic pathways
clt01120
Microbial metabolism in diverse environments
clt01230
Biosynthesis of amino acids
Module
clt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CM240_1001 (ytjP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clt01002
]
CM240_1001 (ytjP)
Enzymes [BR:
clt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CM240_1001 (ytjP)
Peptidases and inhibitors [BR:
clt01002
]
Metallo peptidases
Family M20
CM240_1001 (ytjP)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CDM68165
UniProt:
W6SER0
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All DBs
Position
rep1:1114911..1116299
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AA seq
462 aa
AA seq
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MLDKKVEELRDEFLNSLVEILKINSVEGKKLPGMPFGEGPNEALEKALEICDDLGFNTVN
LDGYVGYAEYGSGEDYVAVLGHLDVVPEGEGWMYPPYGAEIHDGKLYARGVMDDKGPIFA
ALYGLKAIKDLGLPLSKRVRVIFGTNEESGSHDMPYYVEREKPPVAGFTPDGMFPIINGE
KGLTMFRLVKEFSHGEEGVNNIEYIAGGRKANMVPDYCEAKVTGENLSEVLFALEEYADR
TGIKLEGILEEDKLIVKSYGKSAHGSTPEKGINAISGIIAFLGQLDLPKGDIREFIEFYN
KYINFEIHGESMNCDLYDDISGYLSFNVGAIDINKEKGSILLNLRYPVTKTFEEMMNPIE
EIIKDYSISIEDMDHEKPLYFSPDSDLIKILQKVYTEYTGEEATLLSIGGGTYAKTMDNI
VAFGPIFPGKPDLDHQPNECMEIEDLMMCAKIYAKAIYELAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaaaaaagtagaagagttacgtgatgagtttttaaattcattagttgaaata
ctaaaaataaattctgttgaaggaaagaaattgccaggtatgccttttggtgaaggtcca
aatgaagcattagaaaaagcattagaaatttgtgatgatttaggatttaatacagtaaat
ttagatgggtatgttggatatgctgaatatggctctggagaagattatgtggcagttctt
gggcacttggatgtggtaccagaaggagaagggtggatgtatcctccatatggagcagaa
attcatgatggaaagctttatgcaagaggggttatggatgataagggtcctatttttgca
gcactatatggattgaaggctattaaagatttaggtttaccattatctaaaagagttaga
gtaatttttggaacaaatgaggaaagtggttcacatgatatgccttattatgttgaaaga
gaaaaaccaccagtagcgggttttacaccagatggtatgtttccaataattaatggagaa
aaaggacttactatgtttagattagttaaggagttttctcatggtgaagaaggggtaaat
aatatagaatatatagccggaggaagaaaagccaatatggtgcctgattattgtgaggca
aaagttactggagaaaacctaagtgaagtattattcgcattagaagaatatgcagataga
acaggaataaagttagaaggtatattagaagaagataagcttatagtaaaatcttatgga
aagagtgctcatggtagtacgccagaaaaaggtattaatgctatttcaggaataattgct
ttcttaggtcaattagatttaccaaaaggtgatattagagagtttatagaattttataat
aagtatataaattttgaaatacatggtgaatctatgaattgtgatttatatgatgatatt
tcaggatatttatcttttaatgtaggtgcaattgatattaataaagaaaaaggaagtata
ttattaaatttaagatatcctgttactaaaacttttgaggaaatgatgaatcctattgag
gaaataattaaagattatagtatatcaatagaagatatggatcatgaaaagcctttatat
tttagtcctgatagtgatttaattaagatattacaaaaggtatacacagaatacactgga
gaagaagcaacacttttaagtataggtggaggaacttatgcaaagactatggataatata
gtagcattcggaccaatattcccaggaaaaccagatttggatcatcaaccaaatgaatgt
atggaaatagaagatcttatgatgtgtgcgaaaatatatgcaaaagcaatttatgaacta
gcaaaataa
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