Clostridium bornimense: CM240_1092
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Entry
CM240_1092 CDS
T03165
Name
(GenBank) group 1 glycosyl transferase
KO
K02840
UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
Organism
clt
Clostridium bornimense
Pathway
clt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CM240_1092
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
clt01005
]
CM240_1092
Lipopolysaccharide biosynthesis proteins [BR:
clt01005
]
Core region
CM240_1092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Glyco_transf_5
MGDG_synth
Ldh_1_N
DUF5352
Motif
Other DBs
NCBI-ProteinID:
CDM68256
UniProt:
W6RUD7
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Position
rep1:1221571..1222632
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AA seq
353 aa
AA seq
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MIIDIVLYYGQGRGGLEDVITKVSRGLRNKGHRVRVFQAYRPQYIEWEEKLDEIYYYGED
IPWGSYLEQYGNGYKKLLETMDKPDIVLATHAPLQSYICYIGVNEGSDKKTPIISWIHGP
IDFYGGRNLLQYSNAHLAICENVMEDLSKTIEREKIYVVGNPVEVKNQKVCKRPKETLKL
LFVGRFSNVEKRLDILFKALALVKEPWSIQIIGDGIDHDMIVNLSKDLGIYDHIEWMGWK
ENPWDYVQEVSVLILTSDLEGFGLVVVEALSRGIPVISTSCGGPTYMIKNDINGWLIEKK
DYVKLAELLNKLQEKGLNLPDAKNCIDSVLKYDVDNVIDNIEKVLLKECSKEE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgataattgatatagtattgtattatggccagggaagaggcggactagaagatgttatt
acaaaggtttcaagaggattaagaaacaaaggccatagggttagagtatttcaagcatat
agaccccaatatatagaatgggaagagaaattggatgaaatatattattatggagaagat
attccatggggatcatatttggagcaatatggaaatgggtataaaaagcttctagaaacg
atggataaaccagatattgtgttagcaacacatgcaccattgcaaagttatatatgctat
attggcgttaatgaaggatctgataaaaagactccaataatttcatggatacatggtcct
atagatttttatggtggacgtaatttgttacagtatagtaatgcacatttagcaatatgt
gaaaatgttatggaggatctttctaaaactattgaaagagagaaaatatatgtagttgga
aatcctgtagaggtaaagaatcaaaaagtatgtaaaagaccgaaggaaactctaaaatta
ctttttgtaggaaggttttctaatgtggaaaaacgattagatatattatttaaagcttta
gcattggtaaaagagccatggagtattcagattattggagatggaattgatcacgacatg
attgtaaatttgtcaaaagatttaggtatatatgaccatatagaatggatggggtggaaa
gagaatccatgggattatgtacaggaggtatcagttttaatacttacctctgatctagaa
ggatttggacttgtagtagttgaagctttatccagaggaataccagtgatttcaacaagt
tgtggtgggccaacctatatgattaaaaatgatataaatgggtggctaatagaaaagaaa
gattatgtaaaattagcggaattgcttaacaagttacaagaaaaaggcttaaacttacct
gatgctaaaaattgtattgattctgttctaaaatatgatgtggataatgttattgataat
atagaaaaagtattactgaaagaatgcagtaaggaggaatag
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