Clostridium bornimense: CM240_1095
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Entry
CM240_1095 CDS
T03165
Symbol
rffA
Name
(GenBank) Lipopolysaccharide biosynthesis protein RffA
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
clt
Clostridium bornimense
Pathway
clt00541
Biosynthesis of various nucleotide sugars
clt01100
Metabolic pathways
clt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CM240_1095 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clt01007
]
CM240_1095 (rffA)
Enzymes [BR:
clt01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
CM240_1095 (rffA)
Amino acid related enzymes [BR:
clt01007
]
Aminotransferase (transaminase)
Others
CM240_1095 (rffA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Beta_elim_lyase
PfEMP1_CIDRalpha1_dom
Motif
Other DBs
NCBI-ProteinID:
CDM68259
UniProt:
W6RXA3
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All DBs
Position
rep1:1225240..1226385
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AA seq
381 aa
AA seq
DB search
MINFNEPIVTGKEIDNIKSAINLKKISGDGVFTKKCSSWFEKKFNVKKVLFTTSCTHALE
MSALLCDIKPGDEVIAPSYTFVSTVNAFVLRGAKIVFVDIRPDTMNIDEDIIEKAITEKT
KVILPVHYAGVSCDMDKIMKIAKKYNLYVVEDAAQGMMSKYNNMYLGTIGNLGCYSFHET
KNYSMGEGGLLLINDERFIERAEIIREKGTDRSKFFRGEVDKYSWVDIGSSYLPSEINVA
YLYPQLEIVDKINFDRVNSWKCYYKNLKELEKQSLIELPFVPDECEINGHIFYIKVKDIQ
ERDRLINYLKINGVLTVFHYIPLHSSKIGKKYGRFYGEDNYTTKESERILRLPMYYGLKE
KEIIYITSKITEFFAKKNGEK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgattaattttaatgaacctattgttacaggaaaagaaatagacaatattaaatctgct
ataaatttgaaaaaaatttcaggtgatggtgtctttacaaaaaagtgttctagttggttt
gaaaagaagtttaatgttaaaaaggtgctttttactacttcatgtacccatgcattagag
atgtcagcattattatgtgatataaagcctggagatgaagtaattgctccttcatatact
tttgtatcaactgttaatgcatttgttctaagaggtgcaaaaatagtatttgtagatatt
agacctgatactatgaatatagatgaagatattattgaaaaagcaataactgaaaaaaca
aaagttatattacctgttcactatgcaggtgttagttgtgatatggataagattatgaaa
atagcaaaaaagtataatttatatgtggtagaggatgctgcacaaggaatgatgagtaaa
tacaacaatatgtatttaggaactataggtaatcttggatgctatagttttcatgaaacc
aagaattattctatgggagagggagggctactattaataaacgatgaaagatttattgaa
agggctgaaataattagagaaaagggtactgatagaagtaaattttttagaggagaagta
gacaagtattcatgggtagatataggttcctcatatttacctagtgaaataaatgtagca
tatttgtatccacagttagaaattgttgataaaataaattttgatagagttaatagttgg
aaatgttattataagaatctaaaggaattagaaaaacaatctttaatagaattacctttt
gttcctgatgaatgtgagattaatggtcatatattttatataaaggttaaggatatacag
gaaagagatcggttaatcaattatttaaaaattaatggagtgttgacagtatttcattat
ataccactacattcatcaaagattggaaaaaagtacggaaggttttatggagaggataat
tatactacaaaagaaagcgaaagaatattacggttaccaatgtattatggattaaaagaa
aaagaaattatttatattacaagtaaaattacagaattttttgctaaaaaaaatggagaa
aaatga
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