Clostridium bornimense: CM240_1452
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Entry
CM240_1452 CDS
T03165
Name
(GenBank) hypothetical protein
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
clt
Clostridium bornimense
Pathway
clt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CM240_1452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_1452
Enzymes [BR:
clt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CM240_1452
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CM240_1452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
TF_AP-2
IZUMO
VCPO_N
bZIP_1
Motif
Other DBs
NCBI-ProteinID:
CDM68611
UniProt:
W6RVA2
LinkDB
All DBs
Position
rep1:complement(1611191..1611406)
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AA seq
71 aa
AA seq
DB search
MKDFEKKSVALEQIVKNLEDENLTLDKAMKEYEKGVFLAKELMDMLDTAESKINVLTSQG
EKKFIDEEEEL
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattttgaaaagaagtcagtagcattagaacagatagttaaaaatttagaggat
gaaaatttaacattagataaagctatgaaagaatatgaaaaaggagtctttctagcaaaa
gaacttatggatatgctagatactgcagaaagtaagataaatgtattgacatctcaaggc
gagaagaaatttattgatgaagaggaagagctatga
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