Clostridium bornimense: CM240_1527
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Entry
CM240_1527 CDS
T03165
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
clt
Clostridium bornimense
Pathway
clt03030
DNA replication
clt03410
Base excision repair
clt03420
Nucleotide excision repair
clt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CM240_1527 (polA)
03410 Base excision repair
CM240_1527 (polA)
03420 Nucleotide excision repair
CM240_1527 (polA)
03440 Homologous recombination
CM240_1527 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clt03032
]
CM240_1527 (polA)
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_1527 (polA)
Enzymes [BR:
clt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CM240_1527 (polA)
DNA replication proteins [BR:
clt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CM240_1527 (polA)
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CM240_1527 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CM240_1527 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
CDM68685
UniProt:
W6SG53
LinkDB
All DBs
Position
rep1:complement(1679799..1682342)
Genome browser
AA seq
847 aa
AA seq
DB search
MEKLMILDGNSLMNRAFYAVPTLTIADGTHTNGIYGFLNMVDKVKEDIKPDYIVATFDRK
APTFRHLEYKEYKAGRKKMPEELAMQFPILKDILKMMAINIFEIDGFEADDLIGTLSNYA
ESNGLEVYIVTGDRDALQLATDNIKVVLTKNKGEKEIYDANKMMETYGVTPTEFIDVKGL
MGDSSDNIPGVPGIGEKTAYKLIKEYKSIENLLCNLDKLKGKMKENLENNVEQAIFSKKL
ATIETNVPVEIDLEEIKSKEEYDVNGLRKEFTRLQFKSLLSKLPKEDKEDRNIEVLSVTK
VEDISINESDELYITYGVKNSDKISTIELSNLEMFINGKVYNFDLDLIDIEELRDIFQGE
NNKVIHSSKNLYTILRKHNIDLNNVIFDTEIAAYIIDSSRGNYNIKDIVFNVLGEEIEEN
IECSYLKELYLKLKEEIEKLDMQKLYYDVELPLVEVLSSMEEVGFKVDEDKLDELGKEFK
DMIITLEKDIYNLSEEEFNINSPKQLGKILFEKLDLPVIKKTKTGYSTNADVLEKLKDKH
PIVEKIIEYRHVAKLYSTYIEGLKNVIDEDGRIHSSFNQTVTTTGRLSSTEPNLQNIPIR
TEMGRSIRKVFVPFDNDSVILSADYSQIELRVLAHMSEDENMINAFNSHLDIHTKTASEV
FGVKEDEVSSEMRSAAKAVNFGIIYGMSDFALGEDLKISKKEAKKYIDIYFERYPKISEY
LSKLKEDGKKYSYVKTILNRRRFIPEISSSNKIVKALGERLAMNAPIQGSAADIIKLAMV
NVWKRLRKEKLESSIILQVHDEIIINAKRGELEKVKVILKEEMENVIEFSVKLEVDENVG
KTWYEAK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattaatgattttagatggaaattctttgatgaatagagctttttatgctgtt
cctacattgactatagctgatggaacacatacaaatggaatatatggttttttaaatatg
gtagataaagttaaagaggatataaagcctgattatattgtggctacttttgatagaaaa
gcaccaacatttagacatttagaatataaagaatataaagctggaagaaaaaagatgcca
gaagaattggctatgcaatttcctattttaaaagatatattaaaaatgatggctataaat
atttttgaaatagatggttttgaagctgatgatcttataggtactttaagtaattatgct
gaaagtaatgggttagaggtttacatagtaacaggagatagagatgctcttcaattagct
actgataatattaaagtcgttttaacaaaaaacaaaggtgaaaaagaaatttatgatgca
aataaaatgatggaaacatatggtgtaacgccaacagagtttattgatgtaaaaggatta
atgggagattcctcagataatatcccaggagtaccaggcattggagaaaaaacagcatat
aaacttataaaagaatataagagtatagagaatttattatgcaacttagataaacttaaa
ggaaaaatgaaagagaatttagagaataatgtagaacaagcgattttttcaaagaagtta
gcaacaatagagaccaatgtgcctgttgaaatagatttagaagaaattaagtctaaagaa
gaatatgatgttaatggactaagaaaagagtttactagattgcagtttaaatcattatta
tcaaagttgccaaaggaagacaaggaagatagaaatatagaagtcttatcagtgacaaaa
gttgaagatataagtataaatgaaagtgatgagttatatataacctatggtgttaaaaat
tcagataaaatctcaacaatagaattaagcaatttagaaatgtttataaatgggaaagtc
tataattttgatctggatttaatagatatagaagagcttagagatatttttcaaggggaa
aataacaaggtgatacatagttctaaaaatctttatactattttaagaaaacataatatt
gatttaaataatgttatttttgatacagaaatagctgcatatataattgattcttctaga
ggaaactataatattaaggatatagtttttaatgttttgggagaagaaatcgaagaaaat
atagaatgtagttatttaaaagagttatatttaaaattaaaagaagaaatagaaaaatta
gacatgcaaaaactttattatgatgtagagttacctttagtggaagttttatcatctatg
gaagaagtaggttttaaggtagacgaagataagttagatgaactagggaaagaatttaaa
gatatgataataactttagaaaaagatatatataatttaagtgaagaggaatttaacata
aattctccaaaacaattaggtaaaatactatttgaaaagcttgatttaccagttataaag
aaaacaaaaacaggttactcaactaatgcagatgtattagaaaagcttaaagataagcat
cctatagttgaaaagattatagagtatagacatgtggctaaattatattctacctatatt
gagggcctaaaaaatgttatagatgaagatggtagaatacattcatcatttaatcaaact
gttacaacaacaggaagactttcatcaacagagcctaatcttcaaaatataccgattcgt
actgaaatgggtagaagtattagaaaggtatttgtaccatttgataatgatagtgtaatt
ttatcagcggattattctcaaatagaacttagagtgctagctcatatgtctgaagatgag
aatatgattaatgcttttaactctcatttagatatacatacaaaaacagcatcagaggtg
tttggagtaaaagaagatgaggtttcatctgaaatgagaagtgcagcaaaagcagttaat
tttggtattatttatggtatgtcagattttgcattaggtgaagatttaaagatatctaaa
aaagaagcaaagaaatatatagatatatactttgaaagatatcctaagattagtgagtat
ttatcaaagctaaaggaagatgggaaaaaatattcttatgttaaaactattttaaataga
agaagattcatacctgaaatatcatctagtaataagatagttaaggcattaggagaaaga
ttagcaatgaatgcaccaatacaaggtagtgcagcagatattattaagcttgctatggtg
aatgtgtggaagagacttagaaaagaaaaattagaaagttctataatacttcaggtgcac
gatgaaattataattaatgctaagagaggagaacttgaaaaagttaaggtaattttaaaa
gaagagatggaaaatgtaattgaattttcagtgaagcttgaggtggatgaaaatgttggg
aaaacatggtacgaagcaaaatag
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